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Kurth, A.

Publications and source records attributed to Kurth, A..

3 recordsLinked to original sources

Learning sculpts orthogonal task manifolds for continual skill learning in recurrent networks

Humans and animals can learn and seamlessly perform a vast repertoire of behaviors. However, how neural populations incorporate new skills without disrupting previously learned ones remains poorly understood. This challenge is known as catastrophic forgetting in artificial neural networks and is especially severe in recurrent networks, where computation relies on stable internal dynamics. While current machine learning approaches often rely on explicit weight-protection strategies, such approaches do not directly address this challenge. Here we show that orthogonal task manifolds can emerge in recurrent neural networks from a local predictive, error-driven learning rule. Our model preserves task-specific latent dynamics that remain resilient to interference from subsequent learning. Using low-rank connectivity ablations, we causally isolate these latent dynamics, selectively impairing individual tasks while leaving others intact. We further show that the proposed principle generalizes beyond low-dimensional to high-dimensional naturalistic movie replay, suggesting a scalable mechanism for continual learning. Our results identify a solution to catastrophic forgetting by preserving previously learned dynamics in recurrent connectivity, thereby providing a mechanistic bridge between artificial recurrent networks and biological neural circuits.

neuroscience↗

Regeneration and Developmental Enhancers Are Differentially Compatible with Minimal Promoters

Enhancers and promoters are cis-regulatory elements that control gene expression. Enhancers are activated in a cell type-, tissue-, and condition-specific manner to stimulate promoter function and transcription. Zebrafish have emerged as a powerful animal model for examining the activities of enhancers derived from various species through transgenic enhancer assays, in which an enhancer is coupled with a minimal promoter. However, the efficiency of minimal promoters and their compatibility with multiple developmental and regeneration enhancers have not been systematically tested in zebrafish. Thus, we assessed the efficiency of six minimal promoters and comprehensively interrogated the compatibility of the promoters with developmental and regeneration enhancers. We found that the fos minimal promoter and Drosophila synthetic core promoter (DSCP) yielded high rates of leaky expression that may complicate the interpretation of enhancer assays. Notably, the adenovirus E1b promoter, the zebrafish lepb 0.8-kb (P0.8) and lepb 2-kb (P2) promoters, and a new zebrafish synthetic promoter (ZSP) that combines elements of the E1b and P0.8 promoters drove little or no ectopic expression, making them suitable for transgenic assays. We also found significant differences in compatibility among specific combinations of promoters and enhancers, indicating the importance of promoters as key regulatory elements determining the specificity of gene expression. Our study provides guidelines for transgenic enhancer assays in zebrafish to aid in the discovery of functional enhancers regulating development and regeneration.

developmental biology↗

Microbiomes in the insectivorous bat species Mops condylurus rapidly converge in captivity

Bats are well known reservoir hosts for RNA and DNA viruses. The use of captive bats in research has intensified over the past decade as researchers aim to examine the virus-reservoir host interface. In this study, we investigated the effects of captivity on the fecal bacterial microbiome of an insectivorous microbat, Mops condylurus, a bat species that roosts in close proximity to humans and has likely transmitted viral infections to humans. Using amplicon 16S rRNA gene sequencing, we characterized changes in fecal bacterial community composition for individual bats directly at the time of capture and again after six weeks in captivity. We found that microbial community richness by measure of the number of observed operational taxonomic units (OTUs) in bat feces does increase significantly in captivity. Importantly, we found the similarity of microbial community structures of fecal microbiomes between different bats to converge during captivity. We propose a six week-acclimatization period prior to carrying out infection studies or other research influenced by the microbiome composition, which may be advantageous to reduce variation in microbiome composition and minimize biological variation inherent to in vivo experimental studies.

microbiology↗