Biology subjects

Kubben, P. L.

Publications and source records attributed to Kubben, P. L..

6 recordsLinked to original sources

bioRxiv2025

Decoding brain-wide signatures of uninformed choices for BCI assisted decision-making

Decision-making is an essential cognitive function. It can be impaired due to a number of neurological and psychiatric disorders as well as external factors such as time pressure or stress. To assist users during decision-making, we propose a decision-making brain computer interface (BCI) that can alert to uninformed decision-making, prompt additional information seeking and therefore improve decision-making quality. To this aim, we establish the feasibility of decoding uninformed decision-making from local field potentials recorded with implanted stereo-electroencephalography (sEEG) electrodes in 6 participants. We show that decoding of available information above chance level is possible for all participants, both after stimulus presentation, as well as before task response. Starting from stimulus onset, the temporal processing hierarchy of informed vs. uninformed decision-making spans from visual processing through hippocampal memory processes to frontal control network shifting. The anterior insula, known to be a decision-making hub, codes available information during the decision phase prior to button press. These results further elucidate the neural basis of coded information availability and confirm the feasibility of a decision-making BCI.

neuroscience↗

bioRxiv2023

Global motor dynamics - Invariant neural representations of motor behavior in distributed brain-wide recordings

Neural activity is presumed to be correlated with motor behavior almost everywhere in the brain, implying that many different brain processes are involved in generating a behavioral output. Recent studies in multiple non-human species have observed pervasive brain-wide neural activity directly related to motor output. However, similar brain-wide investigations in humans with high-temporal resolution are lacking to date. Here, we recorded invasive data from brain-wide distributed electrodes in humans and reveal global neural dynamics that are predictive of movement across tasks and across participants. The dynamics are remarkably stable between participants with substantially varying electrode configurations and to loss of information. We demonstrate that these global neural dynamics are near brain-wide and present in all participants. Uncovering these global neural dynamics may allow for a more holistic and network-based perspective on motor-related neural activity.

neuroscience↗

bioRxiv2023

Decoding Arbitrary and Informed Decisions from Intracranial Recordings in Humans

Ideally, decisions are made based on prior knowledge, which allows for informed choices. Real life, however, often requires us to make decisions arbitrarily, without sufficient information. Decoding decision making processes from neural activity could allow for cognitive neuroprostheses and Brain-Computer Interfaces (BCIs) to support decision processes in rapid human-machine interactions, weigh decision-making confidence, and further enable neuromodulation protocols for the treatment of reward-related dysfunctions. To understand the differences between the decision-making processes in arbitrary and informed decisions, we recorded intracranial electroencephalography in a large number of cortical and subcortical areas from 5 patients during a categorization task. We demonstrate that individual decisions can be decoded from Local Field Potentials (LFPs) before motor response, in both arbitrary and informed conditions. Our analysis revealed dissimilar spatio-temporal patterns between arbitrary and informed decision-making, with arbitrary decisions being decodable in fewer brain regions and earlier in time compared to informed decisions.

neuroscience↗

bioRxiv2022

Speech Production in Intracranial Electroencephalography: iBIDS Dataset

Speech production is an intricate process involving a large number of muscles and cognitive processes. The neural processes underlying speech production are not completely understood. As speech is a uniquely human ability, it can not be investigated in animal models. High-fidelity human data can only be obtained in clinical settings and is therefore not easily available to all researchers. Here, we provide a dataset of 10 participants reading out individual words while we measured intracranial EEG from a total of 1103 electrodes. The data, with its high temporal resolution and coverage of a large variety of cortical and sub-cortical brain regions, can help in understanding the speech production process better. Simultaneously, the data can be used to test speech decoding and synthesis approaches from neural data to develop speech Brain-Computer Interfaces and speech neuroprostheses.

neuroscience↗

bioRxiv2021

Rapid dynamic naturalistic monitoring of bradykinesia in Parkinson's disease using a wrist-worn accelerometer

IntroductionMotor fluctuations in Parkinsons disease are characterized by unpredictability in the timing and duration of dopaminergic therapeutic benefit on symptoms including bradykinesia and rigidity. These fluctuations significantly impair the quality of life of many Parkinsons patients. However, current clinical evaluation tools are not designed for the continuous, naturalistic (real-world) symptom monitoring needed to optimize clinical therapy to treat fluctuations. Although commercially available wearable motor monitoring, used over multiple days, can augment neurological decision making, the feasibility of rapid and dynamic detection of motor fluctuations is unclear. So far, applied wearable monitoring algorithms are trained on group data. Here, we investigate the influence of individual model training on short timescale classification of naturalistic bradykinesia fluctuations in Parkinsons patients using a single wrist-accelerometer. MethodsAs part of the Parkinson@Home study protocol, 20 Parkinson patients were recorded with bilateral wrist-accelerometers for a one hour OFF medication session and a one hour ON medication session during unconstrained activities in their own homes. Kinematic metrics were extracted from the accelerometer data from the bodyside with the largest unilateral bradykinesia fluctuations across medication states. The kinematic accelerometer features were compared over the whole one-hour recordings, and medication-state classification analyses were performed on one-minute segments of data. The influence of individual versus group model training, data window length, and total amount of training patients included in group model training on classification was analyzed. ResultsStatistically significant areas under the curves (AUCs) for medication induced bradykinesia fluctuation classification were seen in 85% of the Parkinson patients at the single minute timescale using the group models. Individually trained models performed at the same level as the group trained models (mean AUC both 0.70, +/- respectively 0.18 and 0.10) despite the small individual training dataset. AUCs of the group models improved as the length of the feature windows was increased to 300 seconds, and with additional training patient datasets. ConclusionMedication induced fluctuations in bradykinesia can be classified using wrist worn accelerometery at the time scale of a single minute. Rapid, naturalistic Parkinson motor monitoring has important clinical potential to evaluate dynamic symptomatic and therapeutic fluctuations and help tailor treatments on a fast timescale.

neuroscience↗

bioRxiv2020

Real-time Synthesis of Imagined Speech Processes from Minimally Invasive Recordings of Neural Activity

Speech neuroprosthetics aim to provide a natural communication channel to individuals who are unable to speak due to physical or neurological impairments. Real-time synthesis of acoustic speech directly from measured neural activity could enable natural conversations and significantly improve quality of life, particularly for individuals who have severely limited means of communication. Recent advances in decoding approaches have led to high quality reconstructions of acoustic speech from invasively measured neural activity. However, most prior research utilizes data collected during open-loop experiments of articulated speech, which neglects the critical human-in-the-loop aspect of a practical speech neuroprosthetic. Here we present an approach that synthesizes audible speech in real-time for both imagined and whispered speech conditions. Using a participant implanted with stereotactic depth electrodes, we were able to reliably generate audible speech in real-time. The decoding models rely predominately on frontal activity suggesting that speech processes have similar representations when vocalized, whispered, or imagined. Our real-time synthesis approach represents an essential step towards investigating how patients will learn to operate a closed-loop speech neuroprosthesis, as well as the development of techniques that incorporate co-adaptation of the user and system for optimized performance.

neuroscience↗