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Kreutz-Delgado, K.

Publications and source records attributed to Kreutz-Delgado, K..

2 recordsLinked to original sources

Adaptive Example Selection: Prototype-Based Explainability for Interpretable Mitosis Detection

Understanding the decision-making process of black-box neural network classifiers is crucial for their adoption in medical applications, including histopathology and cancer diagnostics. An approach of increasing interest is to clarify how the decisions of neural networks compare to, and perform parallel to, those of highly-trained and knowledgeable clinicians and other medical professionals within their prototypical classes of interest. Motivated by this, we introduce Adaptive Example Selection (AES), a prototype-based explainable AI (XAI) framework that facilitates the interpretability of deep learning models for mitosis detection. AES works by selecting and presenting a small set of real-world mitotic images most informative to a given classification, allowing pathologists to visually assess and understand the neural networks decision by comparing test cases with similar previously annotated examples. AES achieves this by expanding the neural networks confidence/belief function and fitting it to a radial basis function (RBF) approximator, an approach we term Decision Boundary-based Analysis (DBA). This method makes the decision boundary more transparent, offering robust visual insights into the models decisions, and thereby equipping clinicians with the information needed to effectively utilize AI-driven diagnostics. Additionally, AES includes customizable user controls, allowing clinicians to tailor decision thresholds and select prototype examples to better align with their specific diagnostic needs. This flexibility empowers users to engage with the AI model more directly and meaningfully, increasing its practical relevance in clinical settings.

pathology↗

A Bayesian framework for unifying data cleaning, source separation and imaging of electroencephalographic signals

Electroencephalographic (EEG) source imaging depends upon sophisticated signal processing algorithms for data cleaning, source separation, and localization. Typically, these problems are addressed separately using a variety of heuristics, making it difficult to systematize a methodology for extracting robust EEG source estimates on a wide range of experimental paradigms. In this paper, we propose a unifying Bayesian framework in which these apparently dissimilar problems can be understood and solved in a principled manner using a single algorithm. We explicitly model the effect of non-brain sources by augmenting the lead field matrix with a dictionary of stereotypical artifact scalp projections. We propose to populate the artifact dictionary with non-brain scalp projections obtained by running Independent Component Analysis (ICA) on an EEG database. Within a parametric empirical Bayes (PEB) framework, we use an anatomical brain atlas to parameterize a source prior distribution that encourages sparsity in the number of cortical regions. We show that, in our inversion algorithm, PEB+ (PEB with the addition of artifact modeling), the sparsity prior has the property of inducing the segregation of the cortical activity into a few maximally independent components with known anatomical support. Artifacts produced by electrooculographic and electromyographic activity as well as single-channel spikes are also segregated into their respective components. Of theoretical relevance, we use our framework to point out the connections between Infomax ICA and distributed source imaging. We use real data to demonstrate that PEB+ outperforms Infomax for source separation on short segments of data and, unlike the popular Artifact Subspace Removal algorithm, it can reduce artifacts without significantly distorting clean epochs. Finally, we analyze mobile brain/body imaging data to characterize the brain dynamics supporting heading computation during full-body rotations. In this example, we run PEB+ followed by the spectral analysis of the activity in the retrosplenial cortex, largely replicating the findings of previous experimental literature.

neuroscience↗