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Kostin, D. S.

Publications and source records attributed to Kostin, D. S..

2 recordsLinked to original sources

High evolutionary and taxonomic diversity of gerbils (Gerbillus) in the Horn of Africa

The genus Gerbillus represents an example of the successful Pleistocene radiation among rodents, leading to the emergence of almost 50 currently recognized species inhabiting Asia (from the Middle East to northwest India) and Africa (the Saharo-Sahelian region and eastern Africa). During the last two decades, multiple molecular phylogenetic studies helped to decipher the complex subgeneric structure of this speciose group. However, questions concerning the number of phylogenetic lineages (species) within the genus and their evolutionary relationships remained open, especially because of the lack of genetic material from the Horn of Africa. Here we provide for the first time genetic information on Microdillus peeli (being for more than a hundred years a taxon with an unresolved phylogenetic position) and unequivocally show that it is an internal lineage of Gerbillus. Together with one additional newly characterized lineage of apparently subgenus rank (proposed here as subgenus "Pusillus"), endemic to Somali-Masai region in eastern Africa, these findings document that the Horn of Africa is the center of evolutionary diversity of gerbils in general, and of the genus Gerbillus in particular.

zoology↗

Geographic distribution of genetic diversity of Heterocephalus glaber analyzed using whole genome sequencing and a chromosome-scale genome assembly

Naked mole-rats (Heterocephalus glaber) are a species of rodent endemic to the Horn of Africa, notable among mammals for their long lifespans, resistances to a variety of stresses, and eusocial mating behavior. Though their natural range extends across large portions of Kenya, Ethiopia, Somalia, and Djibouti, the large majority of genetic and genomic analyses focus on Kenyan specimens. Here, we constructed a chromosome-scale reference genome assembly for H.glaber, along with new reference assemblies of both the Damaraland mole-rat (Fukomys damarensis) and guinea pig (Cavia porcellus) genomes to aid annotation. We leveraged our H.glaber assembly, along with modern whole-genome sequencing, to characterize the genetic diversity of specimens deriving from Kenya, southern Ethiopia, and eastern Ethiopia. We found the Kenyan and southern Ethiopian specimens to be closely related to each other and highly diverged from eastern Ethiopian specimens. We also found specimens collected from nearby locations in southern Ethiopia to be more closely related to Kenyan specimens than to each other. This unexpected distribution of shared genetic diversity highlights the importance of local migration barriers to gene flow in wild H.glaber populations.

ecology↗