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Kornfeld, J. M. R.

Publications and source records attributed to Kornfeld, J. M. R..

4 recordsLinked to original sources

Constraints for spatially and temporally precise learning in a neural circuit model of reinforcement learning

Reinforcement learning is a key means by which animals learn appropriate actions in a given context. A large body of work suggests that such learning depends on interactions between cortico-basal ganglia circuits and the midbrain dopaminergic system, yet the underlying circuit mechanisms and plasticity rules are not fully understood. Here we present a biologically plausible, multi-region neural circuit model of songbird vocal learning and map it onto the actor-critic framework of reinforcement learning. In this model, stochastic spiking activity in the cortico-basal ganglia pathway implements action selection and drives behavioral exploration, while the pathways driving midbrain dopaminergic signaling evaluate behavioral outcomes and support a reward prediction error based learning rule that approximates stochastic gradient ascent. The model achieves millisecond-scale precise learning that matches observed behavior. We further use the model to examine two fundamental constraints on biological reinforcement learning. First, dopaminergic reinforcement signals are temporally imprecise, which can cause interference between neurons controlling actions that occur close in time. Second, dopaminergic signals are spatially imprecise, which can cause interference between neurons controlling different aspects of behavior but receiving a common reinforcement signal. By jointly modeling the actor and critic components of the circuit, we show that fast updating of reward prediction is crucial for precise and efficient learning under both forms of interference, and the model predicts the experimentally observed timescale of reward prediction updating. These results suggest a circuit-level mechanism by which biological systems achieve reinforcement learning despite the temporal and spatial limitations of global neuromodulatory signals.

neuroscience↗

Songbird connectome reveals tunneling of migratory neurons in the adult striatum

Immature neurons in the adult brain migrate and integrate into existing circuits, where they contribute to plasticity, learning, and complex behaviors. However, how these cells navigate synapse-rich regions of the adult brain remains poorly understood. While prior studies have examined the molecular mechanisms and functional consequences of adult neurogenesis, few have investigated the physical interactions between migrating neurons and their surrounding environment. Here, we use electron microscopy-based connectomics to examine how migrating neurons interact with mature circuit elements in the adult zebra finch striatum. Immature neurons exhibiting migratory features were observed contacting diverse structures in their microenvironment, including the axons, dendrites, synapses, and somas of mature neurons. Surprisingly, these interactions were structurally complex, often involving pronounced deformations of mature somas and the surrounding neuropil. These deformations appeared as "tunnels" made by the migratory neurons as they displaced mature structures along their path. Together, these findings suggest that migrating neurons may physically reshape the mature circuit to reach their targets, revealing an unexpected degree of structural and functional plasticity in the adult brain.

neuroscience↗

The songbird basal ganglia connectome

The basal ganglia (BG) play an essential role in shaping vertebrate behavior, ranging from motor learning to emotions, but comprehensive maps of their canonical synaptic architecture are missing. In mammals, three main neuronal pathways through the BG have been described - the direct, indirect, and hyperdirect pathways - which together orchestrate many aspects of learning and behavior. In songbirds, cell types associated with striatal and pallidal components appear intermingled in a single basal ganglia nucleus, Area X, essential for song learning. This allows for the dense reconstruction of the entire circuit within a compact volume. Here, we introduce the first vertebrate basal ganglia connectome, comprising over 8,500 automated neuron reconstructions connected by about 20 million synapses. High image quality and automated reconstruction allowed analysis with minimal manual proofreading. Based on direct anatomical measurement of synaptic connectivity, we confirm that a direct, indirect and hyperdirect pathway can be traced through Area X. However, detailed morphological and connectomic analysis revealed no clearly distinct direct and indirect medium spiny neuron subpopulations, and a dominance of the direct and hyperdirect pathway. In addition to previously identified neuron types in Area X, we could distinguish three novel GABAergic neuron types, two of which are major output targets of GPe neurons, leading to novel feedback circuitry within Area X. We further found unexpectedly strong neuronal interconnectivity and recurrency between neurons associated with all pathways. Our data thus challenge the universality of the view of the basal ganglia as an information processor organized into discrete feedforward pathways.

neuroscience↗

Combinatorial protein barcodes enable self-correcting neuron tracing with nanoscale molecular context

Mapping nanoscale neuronal morphology with molecular annotations is critical for understanding healthy and dysfunctional brain circuits. Current methods are constrained by image segmentation errors and by sample defects (e.g., signal gaps, section loss). Genetic strategies promise to overcome these challenges by using easily distinguishable cell identity labels. However, multicolor approaches are spectrally limited in diversity, whereas nucleic acid barcoding lacks a cellfilling morphology signal for segmentation. Here, we introduce PRISM (Protein-barcode Reconstruction via Iterative Staining with Molecular annotations), a platform that integrates combinatorial delivery of antigenically distinct, cell-filling proteins with tissue expansion, multi-cycle imaging, barcode-augmented reconstruction, and molecular annotation. Protein barcodes increase label diversity by >750-fold over multicolor labeling and enable morphology reconstruction with intrinsic error correction. We acquired a [~]10 million {micro}m3 volume of mouse hippocampal area CA2/3, multiplexed across 23 barcode antigen and synaptic marker channels. By combining barcodes with shape information, we achieve an 8x increase in automatic tracing accuracy of genetically labelled neurons. We demonstrate PRISM supports automatic proofreading across micron-scale spatial gaps and reconnects neurites across discontinuities spanning hundreds of microns. Using PRISMs molecular annotation capability, we map the distribution of synapses onto traced neural morphology, characterizing challenging synaptic structures such as thorny excrescences (TEs), and discovering a size correlation among spatially proximal TEs on the same dendrite. PRISM thus supports selfcorrecting neuron reconstruction with molecular context.

neuroscience↗