Biology subjects

Koretsky, A. P.

Publications and source records attributed to Koretsky, A. P..

4 recordsLinked to original sources

bioRxiv2026

A reactivated thalamocortical plasticity window promotes learning and is reshaped by experience

Adult sensory loss can reactivate critical-period-like thalamocortical plasticity, but whether this reactivation defines a temporally gated circuit state that facilitates learning and is reciprocally shaped by experience remains unknown. Here we define its in vivo trajectory and functional consequences in adult mouse barrel cortex. Infraorbital nerve transection opened a transient window of enhanced layer 4 thalamocortical gain. Training during this window lowered whisker-detection thresholds and promoted learning by accelerating the transition to stable performance. Local GluN2B blockade prevented both cortical potentiation and the learning advantage, linking critical-period-associated plasticity mechanisms to adaptive behavior in the adult brain. Neuropixels recordings showed that weak inputs preferentially increased neuronal responses, whereas strong inputs produced sharper temporal coding. The relationship was reciprocal: experience reshaped the trajectory of this circuit state, with training before the normal peak advancing the emergence of potentiation, training during the active window prolonging the potentiated state, and training after closure failing to reinstate potentiation. State prolongation accompanied more persistent sensory memory. These findings establish a reciprocal, timing-dependent interaction between endogenous plasticity and experience, revealing a general principle by which adult circuits can convert transient plastic potential into adaptive behavioral change and informing strategies that align training with periods of heightened plasticity.

neuroscience↗

bioRxiv2024

Age Dependent Integration of Cortical Progenitors Transplanted at the Adult CSF-Brain Interface

There has been renewed interest in neural transplantation of cells and tissues for brain repair. Recent studies have demonstrated the ability of transplanted neural precursor cells and in vitro grown organoids to mature and locally integrate into host brain neural circuitry. Much effort has focused on how the transplant behaves and functions after the procedure, but the extent to which the host brain can properly innervate the transplant, particularly in the context of aging, is largely unexplored. Here we report that transplantation of rat embryonic cortical precursor cells into the cerebrospinal fluid-subventricular zone (CSF-SVZ) of adult rat brains generates a brain-like tissue (BLT) at an ectopic site. This model allows for the assessment of long-range connectivity and cellular interactions between the transplant and the host brain as a function of host age. The transplanted precursor cells initially proliferate, then differentiate, and develop into mature BLTs, which receive supportive cellular components from the host including blood vessels, microglia, astrocytes, and oligodendrocytes. There was integration of the BLT into the host brain which occurred at all ages studied, suggesting that host age does not affect the maturation and integration of the transplant-derived BLT. Long-range axonal projections from the BLT into the host brain were robust throughout the different aged recipients. However, long-distance innervation originating from the host brain into the BLT significantly declined with age. This work demonstrates the feasibility and utility of integrating new neural tissue structures at ectopic sites into adult brain circuits to study host-transplant interactions.

neuroscience↗

bioRxiv2021

Anomaly detection in multimodal MRI identifies rare individual phenotypes among 20,000 brains

Outliers in neuroimaging represent spurious data or the data of unusual phenotypes that deserve special attention such as clinical follow-up. Outliers have usually been detected in a supervised or semi-supervised manner for labeled neuroimaging cohorts. There has been much less work using unsupervised outlier detection on large unlabeled cohorts like the UK Biobank brain imaging dataset. Given its large sample size, rare imaging phenotypes within this unique cohort are of interest, as they are often clinically relevant and could be informative for discovering new processes. Here we developed a two-level outlier detection and screening methodology to characterize individual outliers of multiple different brain imaging phenotypes from 20,000 UK Biobank subjects. In primary screening, every subject was parameterized with an outlier score per imaging phenotype to quantitate the degree of outlierness. This approach enabled the assessment of test-retest reliability via outlier scores, which ranged from excellent reliability for ventricular volume, white matter lesion volume, and fractional anisotropy, to good reliability for mean diffusivity and cortical thickness. Resting-state functional connectivity was eliminated for individual-level outlier screening due to its low test-retest reliability of outlier scores. In secondary screening, the extreme outliers (1110 subjects) were examined individually, and those arising from data collection/processing errors were eliminated. A subgroup (108 subjects) of the remaining non-artifactual outliers were radiologically reviewed, and radiological findings were identified in 98%. This study establishes an unsupervised framework for investigating rare individual imaging phenotypes within a large neuroimaging cohort.

neuroscience↗

bioRxiv2019

Mapping the brain-wide network effects by optogenetic activation of the corpus callosum

The optogenetically driven manipulation of circuit-specific activity enabled functional causality studies in animals, but its global effect on the brain is rarely reported. Here, we applied simultaneous fMRI with calcium recording to map brain-wide activity by optogenetic activation of fibers running in one orientation along the corpus callosum(CC) connecting the barrel cortex(BC). Robust positive BOLD signals were detected in the ipsilateral BC due to antidromic activity, which spread to ipsilateral motor cortex(MC) and posterior thalamus(PO). In the orthodromic target (contralateral barrel cortex), positive BOLD signals were reliably evoked by 2Hz light pulses, whereas 40Hz light pulses led to a reversed sign of BOLD - indicative of CC-mediated inhibition. This presumed optogenetic CC-mediated inhibition was further elucidated by pairing light with peripheral whisker stimulation at varied inter-stimulus intervals. Whisker induced positive BOLD, and calcium signals were reduced at inter-stimulus intervals of 50/100ms. The calcium-amplitude modulation (AM)-based correlation with whole-brain fMRI signal revealed that the inhibitory effects spread to contralateral BC as well as ipsilateral MC and PO. This work raises the need of fMRI to elucidate the brain-wide network activation in response to projection-specific optogenetic stimulation.

neuroscience↗