Biology subjects

Kollarova, E.

Publications and source records attributed to Kollarova, E..

6 recordsLinked to original sources

bioRxiv2026

In vivo imaging uncovers an abundant but rarely active pool of plant ARP2/3 complexes associated with exocyst complex subunit

The ARP2/3 complex generates branched actin networks that regulate membrane dynamics across eukaryotes. In plants, ARP2/3 is activated primarily by the WAVE/SCAR complex and is essential for cell morphogenesis, yet its spatiotemporal behavior in living cells remains poorly understood. Using high-resolution live-cell microscopy, we found that, in addition to their previously reported stable accumulation at three-way cell junctions and peroxisomes, WAVE/SCAR and ARP2/3 subunits also form abundant, highly dynamic, short-lived assemblies in the cortical cytoplasm, with lifetimes of only a few seconds. Genetic and colocalization analyses further revealed that only a minority of observed complexes are fully assembled and active, indicating that plant cells maintain a large pool of partially assembled or inactive ARP2/3 structures. Our data indicate that microtubules influence the abundance of cortical assemblies, whereas actin primarily affects their dynamics. Importantly, our analysis demonstrated a spatial and functional association between dynamic ARP2/3 foci and exocytotic events at the plasma membrane. Together, our findings suggest that the cytoplasm of plant epidermal cells contains a large reservoir of ARP2/3 complexes whose localized activation is tightly regulated and associated with membrane trafficking.

plant biology↗

bioRxiv2026

Loss of PR1 function enhances Arabidopsis resistance to Botrytis cinerea

PATHOGENESIS-RELATED 1 (PR1) is one of the most widely used markers of salicylic acid (SA)-dependent plant immunity, yet its direct functional contribution to pathogen defence remains poorly understood. Here, we investigated the role of PR1 in Arabidopsis thaliana by analyzing a pr1 loss-of-function mutant challenged with bacterial and fungal pathogens and fumonisin B1 (FB1)-induced cell death. Notably, loss of PR1 led to markedly different responses to distinct pathogens; while it moderately increased susceptibility to the pathogenic bacterium Pseudomonas syringae, it substantially enhanced resistance to the necrotrophic fungus Botrytis cinerea, and the responses to the necrotroph Sclerotinia sclerotiorum remained unaltered. The pr1 mutant also displayed reduced spread of FB1-induced cell death, linking PR1 function to the promotion of stress-associated cell death. In line with the susceptibility changes, we observed the strongest PR1 accumulation and cell wall enrichment during B. cinerea infection using mCherry-tagged PR1 expressed under its endogenous promoter. Complementation with full-length PR1 and with a C-terminally truncated PR1 variant lacking the CAPE peptide restored wild-type susceptibility, whereas a non-cleavable PR1 variant did not. These results indicate that proteolytic processing at the CAPE cleavage motif, rather than the CAPE peptide itself, is required for PR1 function. Our data thus strongly suggest that PR1 may act as a susceptibility factor for necrotrophic pathogens by promoting host cell death.

Plant Biology↗

bioRxiv2024

The Arabidopsis Class I formin AtFH5 contributes to seedling resistance to salt stress.

The family of formins, evolutionarily conserved multidomain proteins engaged in the control of actin and microtubule cytoskeleton organization, exhibits considerable diversity in plants. Angiosperms have two formin clades consisting of multiple paralogs, Class I and Class II, the former being often transmembrane proteins located at the plasmalemma or endomembranes. According to available transcriptome data, the Arabidopsis thaliana Class I transmembrane formin AtFH5 (At5g54650) exhibits a distinct pattern of transcript abundance in various seedling root tissues with massive increase of transcript level upon salinity stress. To examine a possible role of AtFH5 in NaCl stress response, we generated transgenic plants expressing green fluorescent protein (GFP)-tagged AtFH5 under its native promoter and characterized its tissue and intracellular localization under standard culture conditions and under NaCl stress. While we confirmed the induction of AtFH5 expression by salt treatment, the distribution of tagged protein, with maxima in the border-like cells of the root cap, in the phloem and at lateral root emergence sites, did not reflect previously reported transcript abundance, suggesting posttranscriptional regulation of gene expression. Subcellular localization studies employing also membrane trafficking inhibitors suggested that AtFH5 protein level may be modulated by endocytosis and autophagy. Notably, loss-of-function atfh5 mutants exhibited increased sensitivity to NaCl stress, indicating that AtFH5 contributes to the development of seedling salt tolerance. These findings highlight the functional importance of AtFH5 in abiotic stress responses.

plant biology↗

bioRxiv2024

A genome-wide association screen for genes affecting leaf trichome development and epidermal metal accumulation in Arabidopsis

To identify novel genes engaged in plant epidermal development, we characterized the phenotypic variability of rosette leaf epidermis of 310 sequenced Arabidopsis thaliana accessions, focusing on trichome shape and distribution, compositional characteristics of the trichome cell wall, and histologically detectable metal ion distribution. Some of these traits correlated with climate parameters of ourq accessions locations of origin, suggesting environmental selection. A novel metal deposition pattern in stomatal guard cells was observed in some accessions. Subsequent GWAS analysis identified 1546 loci with protein sequence-altering SNPs associated with one or more traits, including 5 genes with previously reported relevant mutant phenotypes and 80 additional genes with known or predicted roles in relevant developmental and cellular processes. Some candidates, including GFS9/TT9, exhibited environmentally correlated allele distribution. Several large gene families, namely DUF674, DUF784, DUF1262, DUF1985, DUF3741, cytochrome P450, receptor-like kinases, Cys/His-rich C1 domain proteins and formins were overrepresented among the candidates for various traits, suggesting epidermal development-related functions. A possible participation of formins in guard cell metal deposition was supported by observations in available loss of function mutants. Screening of candidate gene lists against the STRING interactome database uncovered several predominantly nuclear protein interaction networks with possible novel roles in epidermal development.

plant biology↗

bioRxiv2019

EXO70A2 is critical for the exocyst complex function in Arabidopsis pollen

Pollen development, pollen grain germination and pollen tube elongation are crucial biological processes in angiosperm plants that need precise regulation to deliver sperm cells to fertilize ovules. Pollen grains undergo two major developmental switches: dehydration characterized by metabolic quiescent state, and rehydration upon pollination that leads to extraordinary metabolic and membrane trafficking activity, resulting in germination and rapid tip growth of pollen tubes. To sustain these processes, many plant housekeeping genes evolved their pollen-specific paralogs. Highly polarized secretion at a growing pollen tube tip requires the exocyst tethering complex responsible for specific targeting of secretory vesicles to the plasma membrane. Here, we describe that EXO70A2 (At5g52340) is the main exocyst EXO70 isoform in Arabidopsis pollen, which governs the conventional secretory function of the exocyst, analogically to EXO70A1 (At5g03540) in the sporophyte. Our analysis of a CRISPR-generated exo70a2 mutant revealed that EXO70A2 is essential for efficient pollen maturation, pollen grain germination and pollen tube growth. GFP:EXO70A2 was localized similarly to other exocyst subunits to the apical domain in growing pollen tube tips characterized by intensive exocytosis. Moreover, EXO70A2 could substitute for the EXO70A1 function in the sporophyte, indicating functional redundancy of these two closely related isoforms. Phylogenetic analysis revealed that the ancient duplication of EXO70A to two (or more) paralogs, one of which is highly expressed in pollen, occurred independently in monocots and dicots. In summary, EXO70A2 is a crucial component of the exocyst complex in the Arabidopsis pollen required for efficient plant sexual reproduction.

plant biology↗

bioRxiv2018

Arabidopsis class I formin FH1 relocates between membrane compartments during root cell ontogeny and associates with plasmodesmata

Formins are evolutionarily conserved eukaryotic proteins engaged in actin nucleation and other aspects of cytoskeletal organization. Angiosperms have two formin clades with multiple paralogs; typical plant Class I formins are integral membrane proteins that can anchor cytoskeletal structures to membranes. For the main Arabidopsis housekeeping Class I formin, FH1 (At3g25500), plasmalemma localization was documented in heterologous expression and overexpression studies. We previously showed that loss of FH1 function increases cotyledon epidermal pavement cell shape complexity via modification of actin and microtubule organization and dynamics. Here we employ transgenic Arabidopsis expressing green fluorescent protein-tagged FH1 (FH1-GFP) from its native promoter to investigate in vivo behaviour of this formin using advanced microscopy techniques. The fusion protein is functional, since its expression complements the fh1 loss-of-function mutant phenotype. Accidental overexpression of FH1-GFP results in a decrease in trichome branch number, while fh1 mutation has the opposite effect, indicating a general role of this formin in controlling cell shape complexity. Consistent with previous reports, FH1-GFP associates with membranes. However, the protein exhibits surprising actin- and secretory pathway-dependent dynamic localization and relocates between cellular endomembranes and the plasmalemma during cell division and differentiation in root tissues, with transient tonoplast localization at the transition/elongation zones border. FH1-GFP also accumulates in actin-rich regions of cortical cytoplasm and associates with plasmodesmata in both the cotyledon epidermis and root tissues. Together with previous reports from metazoan systems, this suggests that formins might have an ancestral role at cell-cell junctions.

plant biology↗