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Kemena, C.

Publications and source records attributed to Kemena, C..

2 recordsLinked to original sources

Structure-function analysis of Factor Seven Activating Protease (FSAP) by in-silico methods and its expression in insect cells.

Factor VII Activating Protease (FSAP) is a circulating serine protease in blood and is likely to be involved in regulating hemostasis and inflammatory processes in stroke. The zymogen form of FSAP (Pro-FSAP) is activated by charged molecules, including heparin and histones. Here, we tested the feasibility of FSAP expression in insect cells and analyzed its structure and evolution with in-silico methods. The expression of full-length (FL) FSAP and the serine protease domain (SPD) was very low, and this was slightly improved with the protease-inactivating mutant. The remainder of the protein, comprising the heavy chain (HC), was expressed at high levels and demonstrated binding to pro-FSAP activators, histones, and heparin. Since FL-FSAP was not satisfactorily expressible for structural studies, the AlphaFold structure was used for molecular dynamics simulations and in-silico docking studies with pro-FSAP activators. AlphaFold predicts a globular structure for the EGF, kringle and the trypsin domain as well as a disordered N-terminal region (NTR). Docking studies suggested that the EGF-3 domain interacts with heparin and the NTR with histones. Very likely, this disturbs the globular fold of the enzyme to expose the activation site and promotes autocatalytic activation. FSAP evolved in its current domain configuration in jawed vertebrates about 500 million years ago suggesting an important and conserved function. The insights from these studies will facilitate the expression of recombinant FSAP as well as enable a deeper understanding of its structure and biological functions in the context of stroke.

biochemistry↗

Hemimetabolous genomes reveal molecular basis of termite eusociality

Around 150 million years ago, eusocial termites evolved from within the cockroaches, 50 million years before eusocial Hymenoptera, such as bees and ants, appeared. Here, we report the first, 2GB genome of a cockroach, Blattella germanica, and the 1.3GB genome of the drywood termite, Cryptotermes secundus. We show evolutionary signatures of termite eusociality by comparing the genomes and transcriptomes of three termites and the cockroach against the background of 16 other eusocial and non-eusocial insects. Dramatic adaptive changes in genes underlying the production and perception of pheromones confirm the importance of chemical communication in the termites. These are accompanied by major changes in gene regulation and the molecular evolution of caste determination. Many of these results parallel molecular mechanisms of eusocial evolution in Hymenoptera. However, the specific solutions are remarkably different, thus revealing a striking case of convergence in one of the major evolutionary transitions in biological complexity.

evolutionary biology↗