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Kavanagh, A.

Publications and source records attributed to Kavanagh, A..

3 recordsLinked to original sources

Optimisation of Solid-Phase Antimicrobial Susceptibility Testing for Hydrophobic Antibiotics Using an Agarose-Based MIC Assay

The minimum inhibitory concentration (MIC) assay is the gold standard for evaluating antimicrobial activity1. However, conventional agar-based MIC methods often underestimate the potency of physicochemically complex compounds[1, 2]. Hydrophobic and adhesive molecules, such as lipoglycopeptide antibiotics, exhibit poor diffusion and non-specific binding to agar, leading to artificially elevated MIC values compared to broth-based methods[3]. This issue complicates accurate potency assessment and is particularly an issue when attempting resistance frequency (FOR) studies, which must be conducted on solid media. Here, we developed a modified miniaturised agar MIC assay using 1% agarose, 0.002% Tween 80-supplemented tryptic soy broth (TSB), and a 24-well plate format[4]. These modifications improved compound dispersion, reduced matrix interactions, and lowered compound requirements. The optimised assay was validated with vancomycin, oritavancin, and dalbavancin against Staphylococcus aureus ATCC 43300 (MRSA) and Streptococcus pneumoniae ATCC 700677. This efficient, cost-effective, high-throughput platform overcomes the limitations of traditional agar methods, enhancing reliability in evaluating challenging antimicrobials and supporting next-generation antibiotic development.

microbiology↗

Neuronal targeted AAV Micro-Dystrophin restores neurobehavioural co-morbidities, grip strength and motor coordination in mdx52 mouse model of Duchenne Muscular Dystrophy

Duchenne muscular dystrophy (DMD) is a X-linked disorder caused by mutations in the DMD gene, which disrupts production of multiple isoforms of dystrophin in multiple organs namely muscle, heart and brain. While progressive muscle disease and cardiomyopathy are the hallmarks of DMD, over 40% of individuals also experience significant neurobehavioral comorbidities, including autism spectrum disorder (ASD), attention deficit hyperactivity disorder (ADHD), obsessive compulsive disorder (OCD) and intellectual disability. These deficits are linked to the loss of brain isoforms and approximately 90% of DMD individuals have loss of either Dp427 or both Dp427 and Dp140 in the brain. We studied the mdx52 mouse model, which lacks these isoforms and exhibits severe fear and anxiety-like behaviours, suitable to evaluate the therapeutic efficacy on neuro-comorbidities after delivering a neuronal-targeted adeno-associated virus (AAV) micro-dystrophin ({micro}Dys) therapy. We compared two delivery routes intravenous (IV) and intracerebroventricular (ICV) in neonatal mdx52 male mice to assess impact on an extensive range of neurobehavioural aspects including emotional reactivity, neurocognitive, OCD and motor coordination deficits. While both routes successfully reduced emotional reactivity and anxiety-related behaviours, IV delivery emerged as the superior therapeutic strategy addressing a more comprehensive spectrum of DMD related brain co-morbidities. Critically, significant improvements in cognitive deficits and OCD-like behaviours were achieved only through IV delivery. This was associated with a widespread lower transduction pattern across the brain, including hindbrain and cerebellum, which were less effectively targeted by ICV injection, although forebrain transduction with ICV delivery was higher. Brain {micro}Dys expression successfully restored dystrophin interactors dystroglycan, syntrophin and pre- and post-synaptic functional interactors VGLUT1, gephyrin, GABAAR with both delivery methods. These results demonstrate that while ICV gene therapy results in improved emotional reactivity and anxiety-related behaviour in the mdx52, only the systemic, neuronal-targeted gene therapy efficiently transduced the central nervous system restoring neuronal synaptic functional complexes of both Dp427 and 140 isoforms and simultaneously restored peripheral NMJ dystrophin deficiency. Beyond cognitive restoration, while both routes improved aspects of gait on CatWalk XT, only IV delivery significantly enhanced motor coordination on the Beam walk and, unexpectedly, normalised grip strength. This was specifically linked to the selective expression of {micro}Dys at neuromuscular junctions (NMJs), which corrected post-synaptic electrophysiological dysfunction of mdx52 mice. Our findings establish a significant foundation for incorporating brain-directed strategies into the future therapeutic approaches for DMD, offering a holistic approach to treating DMD as a multisystemic disease.

neuroscience↗

Characterisation of in vitro resistance selection against second-/last-line antibiotics in methicillin-resistant Staphylococcus aureus

SYNOPSISO_ST_ABSBackgroundC_ST_ABSThe increasing occurrence of MRSA clinical isolates harbouring reduced susceptibility to mainstay antibiotics has escalated the use of second and last line antibiotics. Hence, it is critical to evaluate the likelihood of MRSA developing clinical resistance to these antibiotics. ObjectivesOur study sought to identify the rate in which MRSA develop resistance to vancomycin, daptomycin and linezolid in vitro and further determine the mechanisms underpinning resistance. MethodsMRSA was exposed to increasing concentrations of vancomycin, daptomycin, and linezolid for 20 days, with eight replicates for each antibiotic conducted in parallel. The resulting day 20 (D20) isolates were subjected to antimicrobial susceptibility testing, whole genome sequencing, autolysis assays, and growth curves to determine bacterial fitness. ResultsExposure to vancomycin or linezolid for 20 days resulted in a subtle two-fold increase in the MIC, whereas daptomycin exposure yielded daptomycin-nonsusceptible isolates with up to 16-fold MIC increase. The MIC increase was accompanied by variable changes in relative fitness and reduced resistance to autolysis in some isolates. D20 isolates harboured mutations in genes commonly associated with resistance to the respective antibiotics (e.g. walK for vancomycin, mprF and rpoB for daptomycin, rplC for linezolid), along with several previously unreported variants. Introduction of key mutations to these identified genes in the parental strain via allelic exchange confirmed their role in the development of resistance. ConclusionsIn vitro selection against vancomycin, daptomycin, or linezolid resulted in the acquisition of mutations similar to those correlated with clinical resistance, including the associated phenotypic alterations.

microbiology↗