Radiation Threats to Humans in Space and an alternative approach with Probiotics
Space type radiation is an important factor to consider for scientists on International Space Stations, especially high linear transfer energy (LET) since it has imminent effects on microorganisms. The abundances of bacteria are a good indicator of how radiation influences the gut microbiome. The current study is an attempt towards this; thus, we have employed a public dataset (Bioproject code PRJNA368790) of 80 mice samples treated with a range of doses from 0Gy to 1Gy and feces samples were collected at different time points of post radiation treatment. Metagenomic analysis was performed on this data to understand the effect of radiation doses on the abundance of microbial species or microbial diversity implementing the DADA2 and Phyloseq pipelines. Our analyses have shown that 0.1Gy high LET radiation had the significant effect on the species of bacteria. There is a significant decrease in four types of bacteria, i.e., Bifidobacterium longum, Bifidobacterium castoris, Lactobacillus gasseri and Lactobacillus johnsonii, with p-value of 7.05x10-5, 0.020, 0.057and 0.020, respectively. Additionally, pathway analysis indicates the protein coding products of these bacteria are involved in the GABAergic synaptic pathway. Further, our study has shown the significant difference between post radiation time points, i.e., 10 days vs.30 days and suggested the acclimatization period could be around 10 days for these bacteria.