Biology subjects

Katoh, S.

Publications and source records attributed to Katoh, S..

3 recordsLinked to original sources

bioRxiv2023

HERC3 E3 ligase provides an ERAD branch eliminating select membrane proteins

Aberrant proteins located in the endoplasmic reticulum (ER) undergo rapid ubiquitination by multiple ubiquitin (Ub) E3 ligases and are retrotranslocated to the cytosol as part of the ER-associated degradation (ERAD). Despite several ERAD branches involving different Ub E3 ligases, each with distinct substrate specificity, the molecular machinery responsible for these ERAD branches in mammalian cells remains not fully understood. In this study, we have discovered a cytosolic Ub ligase called HERC3, which fulfills a distinct role in facilitating the ERAD of select polytopic membrane proteins. Using a series of multiplex knockdown/knockout experiments, we have demonstrated that HERC3 functions independently of the ER-embedded ubiquitin ligases RNF5 and RNF185 (RNF5/185) to facilitate the ubiquitination, retrotranslocation, and ERAD of misfolded CFTR. Furthermore, HERC3 collaborates with RNF5/185 to enhance the association of UBQLN proteins, thereby augmenting the retrotranslocation and ERAD of misfolded CFTR. While RNF5/185 participates in the ERAD process of both misfolded ABCB1 and CFTR, HERC3 specifically promotes the ERAD of CFTR, likely due to its ability to interact with the less hydrophobic membrane-spanning domains of CFTR. HERC3 may detect exposed transmembrane domains on the cytoplasmic surface of the ER, thereby facilitating the recruitment of UBQLN and subsequently accelerating the ERAD of select polytopic membrane proteins.

cell biology↗

bioRxiv2023

A hybrid combination of in vitro cultured buccal mucosal cells using two different methodologies, complementing each other in successfully repairing a stricture-inflicted human male urethral epithelium

BackgroundAutologous buccal mucosal tissue derived cell transplantation techniques in repairing a stricture inflicted male urethral epithelium have been evolving. There was not much of clarity on the cell type, in vitro culture methods and the mode of transplantation, until we reported our buccal epithelium expanded and encapsulated in scaffold-hybrid approach to urethral stricture (BEES-HAUS) clinical study yielding a successful engraftment and repair with a long-term patency. We herein report with technical clarity on the advantages of mixing two-dimensional (2D) monolayer cultured fibroblast like cells and three dimensional (3D) thermo-reversible gelation polymer (TGP) cultured cells; the former secreting IGF-1, a cytokine known for its healing effects and the latter expressing epithelial surface markers in flow cytometry, both sourced from human buccal tissue, together transplanted using TGP as a carrier. MethodsHuman buccal tissues (n=22) redundant after urethroplasty surgery was used after informed consent and IEC approval. They were enzyme digested, divided into two portions; one was cultured as monolayer method (2D) and the other in 3D in TGP. Flowcytometry and quantification of IGF-1 in cell culture supernatant through the culture period were undertaken. ResultsIn flowcytometry, the cells on day 0, lacked AE1/AE3 - pancytokeratin expression indicative of epithelial phenotype of culture, which progressively increased in the 3D-TGP group, during invitro culture of up to 21 days. The 2D showed expression of only fibroblasts like cells that were negative for AE1/AE3 but positive for CD140b. IGF-1 secretion was significantly higher in 2D cultures than in 3D-TGP (p-value < 0.05). ConclusionThe 3D- TGP cultured cells of epithelial nature and the 2D cultured fibroblast like cells secreting IGF-1, together when transplanted using TGP scaffold as a carrier, adapted to a hostile in vivo milieu after releasing the fibrous strands with urethrotomy, successfully engrafted and repaired a stricture-inflicted male urethral epithelium in the BEES-HAUS procedure. While this hybrid combination of cells are considered to have potential in managing other epithelial damages, further research of such hybrid combination and their behaviour in disease affected environments may help to expand this solution in regenerating and repairing other tissues and organs as well. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=123 SRC="FIGDIR/small/555240v1_ufig1.gif" ALT="Figure 1"> View larger version (70K): org.highwire.dtl.DTLVardef@1e00b7eorg.highwire.dtl.DTLVardef@12886aorg.highwire.dtl.DTLVardef@b9fbb3org.highwire.dtl.DTLVardef@3bd247_HPS_FORMAT_FIGEXP M_FIG C_FIG Illustration of pathogenesis of urethral stricture and the contribution of the hybrid combination of two-dimensional (2D) and three dimensional, 3D-TGP (Thermo-reversible gelation polymer) cultured cells to the successful repair of the stricture-inflicted male urethral epithelium in the buccal epithelium expanded and encapsulated in scaffold-hybrid approach to urethral stricture (BEES-HAUS) technique.

synthetic biology↗

bioRxiv2021

An efficient polymer cocktail-based transportation method for cartilage tissue, yielding chondrocytes with enhanced hyaline cartilage expression during in vitro culturing

Chondrocytes are used in cell-based therapies such as autologous chondrocyte implantation (ACI) and matrix-associated cartilage implantation (MACI). To transport the cartilage tissue to the laboratory for in vitro culturing, phosphate-buffered saline (PBS), Euro-Collins solution (ECS) and Dulbeccos Modified Eagles Medium (DMEM) are commonly employed at 4-8 {degrees}C. In this study, eight samples of human cartilage biopsy tissues from elderly patients with severe osteoarthritis undergoing arthroscopy, which would otherwise have been discarded, were used. The cartilage tissue samples were compared to assess the cell yield between two transportation groups: i) a thermo-reversible gelation polymer (TGP) based method without cool preservation (~25 {degrees}C) and ii) ECS transport at 4 {degrees}C. These samples were subjected to in vitro culture in a two-dimensional (2D) monolayer for two weeks and subsequently in a three-dimensional (3D) TGP scaffold for six weeks. The cell count obtained from the tissues transported in TGP was higher (0.2 million cells) than those transported in ECS (0.08 million cells) both after initial processing and after in vitro culturing for 2 weeks in 2D (18 million cells compared with 10 million cells). In addition, mRNA quantification demonstrated significantly higher expression of Col2a1 and SOX-9 in 3D-TGP cultured cells and lower expression of COL1a1 in RT-PCR, characteristic of the hyaline cartilage phenotype, than in 2D culture. This study confirms that the TGP cocktail is suitable for both the transport of human cartilage tissue and for in vitro culturing to yield better-quality cells for use in regenerative therapies.

cell biology↗