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Biology subjects

Karmaker, A.

Publications and source records attributed to Karmaker, A..

2 recordsLinked to original sources

Phosphatidylinositol 5-phosphate 4-kinase (PIP4K) regulates sugar homeostasis in Drosophila

Metabolic adaptation such as sugar homeostasis is central to the response of living organisms to environmental changes and in insects, sugar homeostasis is an integral part of larval metabolism. Mutants of phosphatidylinositol 5-phosphate 4-kinase (dPIP4K) show altered growth and larval development. We find that dPIP4K mutants (dPIP4K29) show enhanced glucose uptake by the fat body, accompanied by increased circulating trehalose levels in feeding third instar larvae. Following acute starvation on a low sugar diet, dPIP4K29 larvae show reduced survival associated with high circulating trehalose levels, while under equivalent conditions, wild-type larvae undergo depletion of circulating trehalose. While Tret1-1PA transcripts were upregulated on starvation in muscle and brain tissue of controls, this enhancement was abrogated in dPIP4K29. Muscle specific depletion of Tret1-1PA in wild type larvae prevents reduction of circulating trehalose levels upon starvation, phenocopying that seen in dPIP4K29and selective reconstitution of dPIP4K in muscle of dPIP4K29 could rescue starvation responses to wild type levels. Together, these findings identify dPIP4K as a key regulator of sugar homeostasis in larval tissues and survival in larvae during starvation.

developmental biology↗

Expression and Characterization of SARS-CoV-2 Spike Protein in Thermothelomyces heterothallica C1

The COVID-19 pandemic demonstrated a pressing need for rapid, adaptive, and scalable manufacturing of vaccines and reagents. With the transition into an endemic disease and rising threats of other emerging pandemics, production of these biologicals requires a stable and sustainable supply chain and accessible distribution methods. In this study, we demonstrate the strength of an engineered filamentous fungal platform, Thermothelomyces heterothallica C1, for high volumetric productivity of the full-length spike glycoprotein. Spike protein produced in this system is highly thermostable and immunization of mice with spike made in C1 or mammalian platforms resulted in a similar humoral response. Additionally, it was shown that the native N-glycan profile can be redecorated with complex sialylated structures, if necessary, resulting in a more human-like glycan profile, without impacting binding characteristics as shown experimentally and in simulations. Through extensive physicochemical analysis, the C1 produced spike performs similarly to spike proteins produced in other commercially available systems. The data presented is evidence that C1 can be a strong platform for production of complex glycosylated recombinant proteins such as subunit antigen vaccines.

bioengineering↗