Biology subjects

Jupa, R.

Publications and source records attributed to Jupa, R..

4 recordsLinked to original sources

bioRxiv2026

Beyond air-seeding: Dynamic, multiphase interactionsreveal a two-step mechanism of embolism propagation inangiosperm xylem

BackgroundThe mechanism underlying drought-induced embolism in angiosperm xylem has been attributed to air-seeding. This concept describes the bulk flow of gas from embolised to neighbouring conduits through the penetration of gas-liquid menisci across pores in interconduit pit membranes. While there is compelling evidence for the spatial propagation of embolism, air-seeding rests on various simplifying assumptions. Among others, air-seeding presumes that xylem sap has physical properties comparable to pure water, that pit membranes can be approximated as structures with simple pores, and that embolism occurs whenever a gas-liquid interface crosses a pit membrane. ScopeRecent experimental and theoretical work demonstrates that the biophysical conditions and processes governing gas-liquid interactions at interconduit pit membranes are fundamentally more dynamic and complex than assumed by air-seeding. These phenomena include: (1) gas movement through constriction pore networks, (2) insoluble, polar lipids at conduit surfaces and interfaces, (3) dynamic surface tension of xylem sap that depends on the local packing density of interfacial lipids, (4) bubble snap-off dynamics within pit membranes, (5) surfactant-stabilized nanobubbles in sap that is oversaturated with dissolved gas, and (6) electrostatic interactions between charged interfaces. Importantly, embolism propagation involves bubble generation and embolism formation as distinct, temporarily and spatially separated processes. Embolism formation occurs when nanobubbles become unstable, whereas nanobubbles below critical stability thresholds can remain stable in sap-filled conduits. ConclusionsTogether, these findings reconfirm that pit membranes function as safety valves enabling water transport according to the cohesion-tension theory, and provide mechanistic insights into embolism propagation. They address the question why plants do not suffer constant embolism formation despite negative xylem pressures. We conclude that a revised framework explicitly accounting for the 3D structure of pit membranes, and multiphase, dynamic processes operating within them are required to explain the biophysics underlying water transport and embolism resistance in angiosperm xylem.

plant biology↗

bioRxiv2026

The coordination between xylem and bark hydraulics in temperate Rosaceae species

Xylem and bark properties influence tree growth and drought resistance, yet their functional coordination and their environmental drivers remain unclear. We assessed xylem-bark coordination in branches of eight temperate woody Rosaceae species spanning different ecological preferences. We quantified xylem hydraulic efficiency and safety alongside bark traits governing permeability, hygroscopic water exchange, water storage, and anatomy, and evaluated phylogenetic signal and climatic associations. Bark water vapor conductance (Gbark) increased with maximum xylem hydraulic conductivity (Kh) and with xylem water potential at 50% loss of conductivity (P50), indicating species with more efficient but more embolism-vulnerable xylem developed more permeable bark. Species with higher Gbark showed reduced hygroscopic absorption time, consistent with faster rehydration from atmospheric water vapor. Both Gbark and P50 were phylogenetically conserved and covaried with climatic factors, namely air temperature, vapor pressure deficit (VPD), and isothermality. Species from warmer, high-VPD climates with greater diurnal temperature variability combined higher bark permeability with more vulnerable xylem, implying a shift from embolism avoidance to embolism tolerance strategies. Overall, xylem and bark hydraulics in Rosaceae evolved in concert along diurnal and annual gradients of evaporative demand, showing that drought resistance in woody angiosperms cannot be understood without considering bark traits alongside xylem function. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=104 SRC="FIGDIR/small/730605v1_ufig1.gif" ALT="Figure 1"> View larger version (41K): org.highwire.dtl.DTLVardef@449b24org.highwire.dtl.DTLVardef@2586c8org.highwire.dtl.DTLVardef@1b3dc8dorg.highwire.dtl.DTLVardef@154adda_HPS_FORMAT_FIGEXP M_FIG C_FIG Caption: This study shows that xylem and bark in Rosaceae species form an integrated functional system in which xylem hydraulic safety, efficiency, and bark permeability are jointly tuned along diurnal and annual gradients of air temperature and evaporative demand.

plant biology↗

bioRxiv2026

Stem photosynthesis is coordinated with seasonal growth activity in two temperate tree species

Woody stems conduct both photosynthetic assimilation and respiration. The two processes work in concert, as stem photosynthesis helps refix CO2 released by stem respiration, thereby increasing carbon-use efficiency and generating a local pool of non-structural carbohydrates supporting cambial growth and stem hydraulic function. Despite its importance, little is known about seasonal variation in stem photosynthesis and the factors underlying its activity throughout the season. To fill this gap, we measured stem gas exchange together with growth activity, water status and photosynthetic pigment contents in two temperate species, Acer platanoides L. and Prunus avium L., over the season. In both species, gross photosynthetic rates (Pg) and dark respiration (Rd) changed significantly over the season in a similar pattern, indicating strong coordination between the two processes. Both Pg and Rd reached the highest values in May, during the period of rapid leaf expansion and secondary growth, and declined later in the growing season. At each measurement date, Rd exceeded Pg, resulting in a net CO2 efflux from the stems. The seasonal changes in Pg and Rd translated into seasonal variability in relative refixation of CO2, ranging from 3 to 59% and gradually decreasing towards the end of the season. Additionally, the Pg corresponded with the tissue hydration and increased significantly with increasing stem water potential. In contrast, total chlorophyll content showed less pronounced seasonal variation and thus explained substantially lower seasonal variability in Pg, except for the chlorophyll a/b ratio, which changed dynamically over the season and reached a minimum during the peak of the growing season. Overall, our results reveal that stem photosynthesis varies seasonally in accord with stem growth and water status, while the chlorophyll content has a lower impact on the seasonal changes. These findings are important for our understanding of the carbon relations of trees.

plant biology↗

bioRxiv2023

Cytokinins control secondary cell wall formation in the inflorescence stem of Arabidopsis

Spatiotemporal control over developmental programs is vital to all organisms. Here we show that cytokinin (signaling) deficiency leads to early secondary cell wall (SCW) formation in Arabidopsis inflorescence stem that associates with precocious upregulation of a SCW transcriptional cascade controlled by NAC TFs (NSTs). We demonstrate that cytokinin signaling through the AHK2/3 and the ARR1/10/12 suppresses the expression of several NSTs and SCW formation in the apical portions of stems. Exogenous cytokinin application reconstituted both proper development and apical-basal gradient of NST1 and NST3 in a cytokinin biosynthesis-deficient mutant. We show that AHK2 and AHK3 required functional NST1 or NST3 to control SCW initiation in the interfascicular fibers, further evidencing that cytokinins act upstream of NSTs transcription factors. The premature onset of a rigid SCW biosynthesis and altered expression of NST1/3 and VND6/7 due to cytokinin deficiency led to the formation of smaller tracheary elements (TEs) and impaired hydraulic conductivity. We conclude that cytokinins downregulate NSTs to inhibit premature SCW formation in the apical part of the inflorescence stem, facilitating thus the development of fully functional TEs and interfascicular fibers. Summary statementCytokinins attenuate premature secondary cell wall (SCW) formation via downregulating the expression of NAC TFs, the master switches of SCW transcriptional cascade, thus affecting the tracheary elements size and conductivity.

plant biology↗