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Junker, P.

Publications and source records attributed to Junker, P..

2 recordsLinked to original sources

Biofilm development of Porphyromonas gingivalis on titanium surfaces in response to 1,4-dihydroxy-2-naphthoic acid - a hybrid in vitro - in silico approach

Colonization of titanium dental implants by the oral pathogen Porphyromonas gingivalis can lead to peri-implant diseases and, ultimately, implant failure. P. gingivalis growth can be stimulated by 1,4-dihydroxy-2-naphthoic acid (DHNA), a menaquinone precursor from various oral bacteria, yet its impact on biofilm formation remains unclear. The aim of the study was to evaluate P. gingivalis growth and metabolic activity over six days in response to DHNA on two titanium grade IV surfaces with different roughness using a hybrid in vitro - in silico approach. P. gingivalis growth was modestly stimulated by DHNA and exhibited an inverse correlation with ammonia concentration in culture medium. Notably, this growth pattern transitioned from an initial linear phase to a later exponential phase, with DHNA-treated biofilms reaching this exponential shift at an earlier stage than untreated controls. Confocal microscopy revealed that DHNA-treated biofilms exhibited surface-dependent growth patterns, with larger biofilm volumes observed on rougher surfaces in later biofilm stages, compared to smoother surfaces. Regardless of surface characteristics, the area occupied by biofilms and the size of the aggregates exhibited a consistent and progressive increase over time and was larger in late DHNA-treated biofilms. The experimental data were used to calibrate a coupled finite element method (FEM)-based model that simulated P. gingivalis biofilm dynamics and nutrient utilization. Summarizing, DHNA moderately stimulated P. gingivalis growth, accelerated its transition to ammonia-independent growth, and promoted an increase in biofilm area and aggregate size. Our coupled approach offers significant potential for advancing in vitro biofilm research. ImportanceResults of our hybrid in vitro - in silico experiments advance the research on P. gingivalis physiology and its DHNA-dependent colonization of implant surfaces. Our findings reveal that DHNA accelerates P. gingivalis growth, induces aggregation and promotes colonization of titanium surfaces. For the first time, DHNA-induced P. gingivalis growth acceleration and an earlier shift away from ammonia dependency were observed fluorometrically, highlighting ammonia assimilation as a promising marker of P. gingivalis physiology during early biofilm expansion. Understanding how growth factors together with surface properties influence P. gingivalis colonization offers a basis for future preventive strategies. Our studys stringent characterization of 3D surface texture parameters is expected to improve reproducibility of biofilm-surface interactions experiments. The findings were validated using a continuum-based in silico model, initiating a hybrid approach where computational models complement in vitro research. Our interdisciplinary approach offers a versatile framework for investigating additional aspects of oral biofilms on titanium.

microbiology↗

The use of thermostable fluorescent proteins for live imaging in Sulfolobus acidocaldarius

Among hyperthermophilic organisms, in vivo protein localization is challenging due to the high growth temperatures that can disrupt proper folding and function of mostly mesophilic-derived fluorescent proteins. While protein localization in the thermophilic model archaeon S. acidocaldarius has been achieved using antibodies with fluorescent probes in fixed cells, the use of thermostable fluorescent proteins in thermophilic archaea has so far been unsuccessful. Given the significance of live protein localization in the field of archaeal cell biology, we aimed to identify fluorescent proteins for use in S. acidocaldarius. To achieve this, we expressed various previously published and optimized thermostable fluorescent proteins along with fusion proteins of interest and analyzed the cells using flow cytometry and (thermo-) fluorescent microscopy. Of the tested proteins, Thermal Green Protein (TGP) exhibited the brightest fluorescence when expressed in Sulfolobus cells. By optimizing the linker between TGP and a protein of interest, we could additionally successfully fuse proteins with minimal loss of fluorescence. TGP-CdvB and TGP-PCNA1 fusions displayed localization patterns consistent with previous immunolocalization experiments. These initial results in protein localization in S. acidocaldarius at high temperatures, combined with recent advancements in thermomicroscopy, open new avenues in the field of archaeal cell biology. This progress finally enables localization experiments in thermophilic archaea, which have so far been limited to mesophilic organisms.

microbiology↗