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Biology subjects

Josic, K.

Publications and source records attributed to Josic, K..

3 recordsLinked to original sources

Optimal evidence accumulation on social networks

A fundamental question in biology is how organisms integrate sensory and social evidence to make decisions. However, few models describe how both these streams of information can be combined to optimize choices. Here we develop a normative model for collective decision making in a network of agents performing a two-alternative forced choice task. We assume that rational (Bayesian) agents in this network make private measurements, and observe the decisions of their neighbors until they accumulate sufficient evidence to make an irreversible choice. As each agent communicates its decision to those observing it, the flow of social information is described by a directed graph. The decision-making process in this setting is intuitive, but can be complex. We describe when and how the absence of a decision of a neighboring agent communicates social information, and how an agent must marginalize over all unobserved decisions. We also show how decision thresholds and network connectivity affect group evidence accumulation, and describe the dynamics of decision making in social cliques. Our model provides a bridge between the abstractions used in the economics literature and the evidence accumulator models used widely in neuroscience and psychology.

neuroscience

Optimizing sequential decisions in the drift-diffusion model

To make decisions organisms often accumulate information across multiple timescales. However, most experimental and modeling studies of decision-making focus on sequences of independent trials. On the other hand, natural environments are characterized by long temporal correlations, and evidence used to make a present choice is often relevant to future decisions. To understand decision-making under these conditions we analyze how a model ideal observer accumulates evidence to freely make choices across a sequence of correlated trials. We use principles of probabilistic inference to show that an ideal observer incorporates information obtained on one trial as an initial bias on the next. This bias decreases the time, but not the accuracy of the next decision. Furthermore, in finite sequences of trials the rate of reward is maximized when the observer deliberates longer for early decisions, but responds more quickly towards the end of the sequence. Our model also explains experimentally observed patterns in decision times and choices, thus providing a mathematically principled foundation for evidence-accumulation models of sequential decisions.

neuroscience

Boundary-Driven Emergent Spatiotemporal Order in Growing Microbial Colonies

We introduce a tractable stochastic spatial Moran model to explain experimentally-observed patterns of rod-shaped bacteria growing in rectangular microfluidic traps. Our model shows that spatial patterns can arise as a result of a tug-of-war between boundary effects and modulations of growth rate due to cell-cell interactions. Cells align parallel to the long side of the trap when boundary effects dominate. However, when the magnitude of cell-cell interactions exceeds a critical value, cells align orthogonally to the traps long side. Our model is analytically tractable, and completely solvable under a mean-field approximation. This allows us to elucidate the mechanisms that govern the formation of population-level patterns. The model can be easily extended to examine various types of interactions that can shape the collective behavior in bacterial populations.

biophysics