Biology subjects

Jonikaitis, D.

Publications and source records attributed to Jonikaitis, D..

8 recordsLinked to original sources

bioRxiv2026

A System for Live Sorting of Neuronal Spiking Activity from Large-scale Recordings

Online monitoring of neuronal activity has tremendous value for closed-loop control in both experimental and clinical settings, yet established methods rely primarily on thresholded neural activity, rather than sorted single-neuron spikes. The recent introduction of large-scale electrophysiological tools has greatly expanded single-neuron recording capacity in animals and humans highlighting the need to sort spikes during data collection. Here, we describe a system for live spike sorting (LSS) populations of hundreds of neurons with millisecond-scale latency. Using neurophysiological recordings from macaque visual cortex with Neuropixels probes, we show that LSS closely replicates the temporal responses and tuning of single neurons obtained using offline sorting. We further show that decoding neural signals with LSS achieves the same performance as that obtained from offline sorting. Lastly, we demonstrate the capacity of LSS to enable closed-loop interventions based on the activity of specific neuronal subclasses.

neuroscience↗

bioRxiv2023

Cue-specific neuronal ensembles span intermittent rate coding of working memory

Persistent, memorandum-specific neuronal spiking activity has long been hypothesized to underlie working memory. However, emerging evidence suggests a possible role for activity-silent synaptic mechanisms. This issue remains controversial because evidence for either view has largely depended on datasets that fail to capture single-trial population dynamics or on indirect measures of neuronal spiking. We addressed this by examining the dynamics of mnemonic information on single trials obtained from large, local populations of prefrontal neurons recorded simultaneously in monkeys performing a working memory task. We show that mnemonic information does not persist in the spiking activity of prefrontal neurons, but instead alternates between On and Off periods during memory delays. At the level of single neurons, Off periods are driven by a coordinated loss of selectivity for memoranda and a return of firing rates to baseline levels. Further exploiting the large-scale recordings, we asked whether the functional connectivity among large neuronal ensembles depended on information held in working memory. We show that mnemonic information is available in the pattern of ensemble connectivity during the memory delay in both On and Off periods of neuronal activity. Intermittent epochs of memoranda-specific spiking therefore coexist with activity-silent mechanisms to span memory delays.

neuroscience↗

bioRxiv2023

Action space restructures visual working memory in prefrontal cortex

Visual working memory enables flexible behavior by decoupling sensory stimuli from behavioral actions. While previous studies have predominantly focused on the storage component of working memory, the role of future actions in shaping working memory remains unknown. To answer this question, we used two working memory tasks that allowed the dissociation of sensory and action components of working memory. We measured behavioral performance and neuronal activity in the macaque prefrontal cortex area, frontal eye fields. We show that the action space reshapes working memory, as evidenced by distinct patterns of memory tuning and attentional orienting between the two tasks. Notably, neuronal activity during the working memory period predicted future behavior and exhibited mixed selectivity in relation to the sensory space but linear selectivity relative to the action space. This linear selectivity was achieved through the rapid transformation from sensory to action space and was subsequently maintained as a stable cross-temporal population activity pattern. Combined, we provide direct physiological evidence of the action-oriented nature of frontal eye field neurons during memory tasks and demonstrate that the anticipation of behavioral outcomes plays a significant role in transforming and maintaining the contents of visual working memory.

neuroscience↗

bioRxiv2023

Dissociating the Contributions of Frontal Eye Field Activity to Spatial Working Memory and Motor Preparation

Neurons within dorsolateral prefrontal cortex of primates are characterized by robust persistent spiking activity exhibited during the delay period of working memory tasks. This includes the frontal eye field (FEF) where nearly half of the neurons are active when spatial locations are held in working memory. Past evidence has established the FEFs contribution to the planning and triggering of saccadic eye movements as well as to the control of visual spatial attention. However, it remains unclear if persistent delay activity reflects a similar dual role in movement planning and visuospatial working memory. We trained monkeys to alternate between different forms of a spatial working memory task which could dissociate remembered stimulus locations from planned eye movements. We tested the effects of inactivation of FEF sites on behavioral performance in the different tasks. Consistent with previous studies, FEF inactivation impaired the execution of memory-guided saccades, and impaired performance when remembered locations matched the planned eye movement. In contrast, memory performance was largely unaffected when the remembered location was dissociated from the correct eye movement response. Overall, the inactivation effects demonstrated clear deficits on eye movements, regardless of task type, but little or no evidence of a deficit in spatial working memory. Thus, our results indicate that persistent delay activity in the FEF contributes primarily to the preparation of eye movements and not to spatial working memory.

neuroscience↗

bioRxiv2020

Robust Encoding of Abstract Rules by Distinct Neuronal Populations in Primate Visual Cortex

It is widely known that neural activity in sensory representations is modulated by cognitive factors such as attention, reward value and working memory. In such cases, sensory responses are found to reflect a selection of the specific sensory information needed to achieve behavioral goals. In contrast, more abstract behavioral constraints that do not involve stimulus selection, such as task rules, are thought to be encoded by neurons at later stages. We show that information about abstract rules is encoded by neurons in primate visual cortex in the absence of sensory stimulation. Furthermore, we show that rule information is greatest among neurons with the least visual activity and the weakest coupling to local neuronal networks. Our results identify rule-specific signals within a sensory representation and suggest that distinct mechanisms exist there for mapping rule information onto sensory guided decisions.

neuroscience↗

bioRxiv2020

Eye and hand movements disrupt attentional control

Voluntary attentional control is the ability to selectively focus on a subset of visual information in the presence of other competing stimuli. While it is well established that this capability is a marker of cognitive control that allows for flexible, goal-driven behavior, it is still an open question how robust it is. In this study we contrasted voluntary attentional control with the most frequent source of automatic, involuntary attentional orienting in daily life--shifts of attention prior to goal-directed eye and hand movements. In a multi-tasking paradigm, we asked participants to attend at a location while planning eye or hand movements elsewhere. We observed that voluntary attentional control suffered with every simultaneous action plan. Crucially, this impairment occurred even when we reduced task difficulty and memory load--factors known to interfere with attentional control. Furthermore, the performance cost was limited to voluntary attention. We observed simultaneous attention benefits at two movement targets without attentional competition between them. This demonstrates that the visual system allows for the concurrent representation of multiple attentional foci. It further reveals that voluntary attentional control is extremely fragile and dominated by automatic, premotor shifts of attention. We propose that action-driven selection disrupts voluntary attention and plays a superordinate role for visual selection.

neuroscience↗

bioRxiv2019

Sounds are remapped across saccades

To achieve visual space constancy, our brain remaps eye-centered projections of visual objects across saccades. Here, we measured saccade trajectory curvature following the presentation of visual, auditory, and audiovisual distractors in a double-step saccade task to investigate if this stability mechanism also accounts for localized sounds. We found that saccade trajectories systematically curved away from the position at which either a light or a sound was presented, suggesting that both modalities are represented in eye-centered oculomotor centers. Importantly, the same effect was observed when the distractor preceded the execution of the first saccade. These results suggest that oculomotor centers keep track of visual, auditory and audiovisual objects by remapping their eye-centered representations across saccades. Furthermore, they argue for the existence of a supra-modal map which keeps track of multi-sensory object locations across our movements to create an impression of space constancy.

neuroscience↗

bioRxiv2018

Pre-saccadic remapping relies on dynamics of spatial attention

Each eye movement shifts the projections of the visual scene on the retina. It has been proposed that the receptive fields of neurons in oculomotor areas are remapped pre-saccadically to account for these shifts. While remapping of the whole visual scene seems prohibitively complex, selection by visual attention may limit these processes to a subset of attended locations. Because attentional selection consumes time, remapping of attended locations should evolve in time, too. In our study, we cued a spatial location by presenting an attention capturing cue at different times before a saccade and constructed detailed maps of attentional allocation across the visual field. We observed no remapping when the cue appeared shortly before saccade. In contrast, when the cue appeared sufficiently early before saccade, attentional resources were reallocated to the remapped location. Our results suggest that pre-saccadic remapping is an attentional process relying on the spatial and temporal dynamics of visual attention.

neuroscience↗