bioRxiv ScienceSearch

Biology subjects

Hutchinson, J. B.

Publications and source records attributed to Hutchinson, J. B..

3 recordsLinked to original sources

Functional connectivity gradients as a common neural architecture for predictive processing in the human brain

Predictive processing is emerging as a common computational hypothesis to account for diverse psychological functions subserved by a brain, providing a systems-level framework for characterizing structure-function relationships of its distinct substructures. Here, we contribute to this framework by examining gradients of functional connectivity as a low dimensional spatial representation of functional variation in the brain and demonstrating their computational implications for predictive processing. Specifically, we investigated functional connectivity gradients in the cerebral cortex, the cerebellum, and the hippocampus using resting-state functional MRI data collected from large samples of healthy young adults. We then evaluated the degree to which these structures share common principles of functional organization by assessing the correspondence of their gradients. We show that the organizing principles of these structures primarily follow two functional gradients consistent with the existing hierarchical accounts of predictive processing: A model-error gradient that describes the flow of prediction and prediction error signals, and a model-precision gradient that differentiates regions involved in the representation and attentional modulation of such signals in the cerebral cortex. Using these gradients, we also demonstrated triangulation of functional connectivity involving distinct subregions of the three structures, which allows characterization of distinct ways in which these structures functionally interact with each other, possibly subserving unique and complementary aspects of predictive processing. These findings support the viability of computational hypotheses about the functional relationships between the cerebral cortex, the cerebellum, and the hippocampus that may be instrumental for understanding the brains dynamics within its large-scale predictive architecture.

neuroscience

A massive 7T fMRI dataset to bridge cognitive and computational neuroscience

Extensive sampling of neural activity during rich cognitive phenomena is critical for robust understanding of brain function. We present the Natural Scenes Dataset (NSD), in which high-resolution fMRI responses to tens of thousands of richly annotated natural scenes are measured while participants perform a continuous recognition task. To optimize data quality, we develop and apply novel estimation and denoising techniques. Simple visual inspections of the NSD data reveal clear representational transformations along the ventral visual pathway. Further exemplifying the inferential power of the dataset, we use NSD to build and train deep neural network models that predict brain activity more accurately than state-of-the-art models from computer vision. NSD also includes substantial resting-state and diffusion data, enabling network neuroscience perspectives to constrain and enhance models of perception and memory. Given its unprecedented scale, quality, and breadth, NSD opens new avenues of inquiry in cognitive and computational neuroscience.

neuroscience

A computational neural model for mapping degenerate neural architectures

Degeneracy in biological systems refers to a many-to-one mapping between physical structures and their functional (including psychological) outcomes. Despite the ubiquity of the phenomenon, traditional analytical tools for modeling degeneracy in neuroscience are extremely limited. In this study, we generated synthetic datasets to describe three situations of degeneracy in fMRI data to demonstrate the limitations of the current univariate approach. We describe a novel computational approach for the analysis referred to as neural topographic factor analysis (NTFA). NTFA is designed to capture variations in neural activity across task conditions and participants. The advantage of this discovery-oriented approach is to reveal whether and how experimental trials and participants cluster into task conditions and participant groups. We applied NTFA on simulated data, revealing the appropriate degeneracy assumption in all three situations and demonstrating NTFAs utility in uncovering degeneracy. Lastly, we discussed the importance of testing degeneracy in fMRI and the implications of applying NTFA to do so.

neuroscience