Hur, J. I. | bioRxiv Science

bioRxiv2024

Pleiotropic cellular responses underlying antibiotic tolerance in Campylobacter jejuni

Antibiotic tolerance enables antibiotic-susceptible bacteria to withstand prolonged exposure to high concentrations of antibiotics. Although antibiotic tolerance presents a major challenge for public health, its underlying molecular mechanisms remain to be elucidated. Previously, we have demonstrated that Campylobacter jejuni develops tolerance to clinically important antibiotics, including ciprofloxacin and tetracycline. To identify cellular responses associated with antibiotic tolerance, we conducted RNA-sequencing analysis on C. jejuni following the induction of antibiotic tolerance through exposure to elevated levels of ciprofloxacin or tetracycline. Additionally, we constructed knockout mutants for genes that showed significant changes in expression levels during antibiotic tolerance. We observed a significant upregulation of genes involved in protein chaperones, bacterial motility, DNA repair system, drug efflux pump, and iron homeostasis during antibiotic tolerance. Furthermore, the viability of these knockout mutants was significantly reduced compared to the wild-type strain, indicating the critical role of these cellular responses in sustaining antibiotic tolerance. Notably, we also found that the protein chaperone mutants {Delta}dnaK, {Delta}clpB, and {Delta}groESL exhibited increased protein aggregates under antibiotic treatment, suggesting protein chaperones play a critical role in managing protein aggregation and facilitating the survival of C. jejuni during antibiotic tolerance. In conclusion, our findings demonstrate that various cellular defense mechanisms collectively contribute to sustaining antibiotic tolerance in C. jejuni, providing novel insights into the molecular mechanisms of antibiotic tolerance that enable C. jejuni to withstand the lethal effects of antibiotics.

microbiology↗

bioRxiv2022

Phylogenetic Association and Genetic Factors in Cold Stress Tolerance in Campylobacter jejuni

Campylobacter jejuni is a major foodborne pathogen transmitted to humans primarily via contaminated poultry meat. Since poultry meat is generally processed, distributed, and stored in the cold chain, the survival of C. jejuni at refrigeration temperatures crucially affects human exposure to C. jejuni. Here, we investigated genetic factors associated with cold stress tolerance in C. jejuni. Seventy-nine C. jejuni strains isolated from retail raw chicken exhibited different survival levels at 4{degrees}C for 21 days. Multilocus sequence typing (MLST) clonal complex (CC)-21 and CC-443 were dominant among cold stress-tolerant strains, whereas CC-45 was common among cold stress-sensitive strains. Genome-wide average nucleotide identity (ANI) analysis identified a phylogenetic cluster associated with cold stress tolerance. Moreover, a pan-genome analysis revealed 58 genes distinctively present in the cold stress-tolerant phylogenetic cluster. Among the 58 genes, cfrA, encoding the ferric enterobactin receptor involved in ion transport and metabolism, was selected for further analysis. Remarkably, the viability of a {Delta}cfrA mutant at 4{degrees}C was significantly decreased, while the levels of total reactive oxygen species and intracellular iron exceeded those in the wild type. Additionally, a knockout mutation of cfrA also significantly decreased the viability of three cold stress-tolerant isolates at 4{degrees}C, confirming the role of cfrA in cold stress tolerance. The results of this study demonstrate that unique phylogenetic clusters of C. jejuni associated with cold stress tolerance exist and that cfrA is a genetic factor contributing to cold stress tolerance in C. jejuni. IMPORTANCEThe tolerance of foodborne pathogens to environmental stresses significantly affects food safety. Several studies have demonstrated that C. jejuni survives extended exposure to low temperatures, but the mechanisms of cold stress tolerance are not fully understood. Here, we demonstrate that C. jejuni strains in certain phylogenetic groups exhibit increased tolerance to cold stress. Notably, cfrA is present in the phylogenetic cluster associated with cold stress tolerance and plays a role in C. jejuni survival at low temperatures by alleviating oxidative stress. This is the first study to discover phylogenetic associations involving cold stress tolerance and identify genetic elements conferring cold stress tolerance in C. jejuni.

microbiology↗