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Huie, J. M.

Publications and source records attributed to Huie, J. M..

2 recordsLinked to original sources

Habitat and complex life cycles promote morphological diversity in salamander limb bones

Salamander evolution featured multiple transitions between water and land that likely promoted distinct adaptations in limb bones for buoyancy control versus increased load-bearing capacities, respectively. Many extant species spend their entire lives either in water or on land, while, others undergo water-land transitions within their lifetime. However, exposure to both environments may impose competing demands that restrict adaptive evolution for a particular habitat. Using a 3D morphological dataset of 133 species spanning the phylogenetic and ecological breadth of salamanders, we find that the external and internal morphology of limb bones are evolutionarily decoupled, which increases the evolvability of limb bones in response to diverse mechanical demands. Terrestrial salamanders have stiffer bones with greater resistance to fracture, while aquatic species have denser bones that are hypothesized to aid in buoyancy regulation. We uncover a functional trade-off between stiffness and density that promotes stiff yet lightweight bones in terrestrial lineages. Released from terrestrial constraints, aquatic paedomorphs have disparate external morphologies, whereas terrestrial direct developers consistently share a rod-like bone shape. Aquatic and terrestrial multiphasic taxa show less morphological divergence than monophasic species living in comparable habitats but are not constrained by their complex life cycle. Multiphasic species have distinct external limb bone shapes that have evolved as fast or faster than monophasic species. Taken together, we propose that the trade-offs imposed by different habitats and complex life cycles increase limb bone diversity by promoting alternate evolutionary pathways.

evolutionary biology↗

The genomics of convergent adaptation to intertidal gravel beaches in Mediterranean clingfishes

IntroductionUnderstanding the genetic basis of widespread phenotypic convergence, particularly for complex morphological traits, remains a major challenge in evolutionary biology. The Mediterranean gravel beach clingfishes of the genus Gouania provide an excellent system to study this phenomenon. Within this genus, two distinct morphotypes, "slender" and "stout", have repeatedly evolved, adapting to different microhabitats. These morphotypes differ in multiple complex traits, including body elongation, head compression, vertebral number, eye size, and the structure of the adhesive disc. Materials and MethodsIn a first step, to scrutinize phylogenetic convergence, we combined 3D morphometrics of the pelvic girdle and skull, with molecular species delimitation based on >660 DNA barcodes, and a phylogenomic framework based on more than 3,400 single-copy orthologs. Secondly, by employing whole-genome resequencing and a novel "convergence score" statistic, we examined genomic convergence across multiple levels: nucleotides, sequences, genes, and functional pathways. Results and DiscussionWhile we found no evidence of large-scale genomic or protein-level convergence, we identified promising candidate regions at the level of single variants, genes, and biological pathways. Notably, a longer shared (but interrupted) haplotype around the morphogene adam12 was associated with convergent traits. The lack of simple genomic patterns may reflect the radiations age and the complex genetic basis of the underlying morphological traits (e.g., eye-size, neurocranium shape). Altogether, our findings highlight the importance of assessing genomic convergence at multiple molecular levels to uncover diagnostic signals across varying evolutionary processes and timescales. GRAPHICAL ABSTRACT O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=149 SRC="FIGDIR/small/675783v1_ufig1.gif" ALT="Figure 1"> View larger version (61K): org.highwire.dtl.DTLVardef@58265eorg.highwire.dtl.DTLVardef@13f1deaorg.highwire.dtl.DTLVardef@c51d79org.highwire.dtl.DTLVardef@112217d_HPS_FORMAT_FIGEXP M_FIG C_FIG

evolutionary biology↗