Biology subjects

Hugo, H.

Publications and source records attributed to Hugo, H..

4 recordsLinked to original sources

bioRxiv2026

Genome assemblies and annotations of the poneroid ants Platythyrea mocquerysi (Ponerinae) and Stigmatomma oregonense (Amblyoponinae)

We present draft genome assemblies for two poneroid ant species with distinctive life history traits: Platythyrea mocquerysi Emery, 1899 (Ponerinae) and Stigmatomma oregonense Wheeler, 1915 (Amblyoponinae). Platythyrea mocquerysi is a Malagasy ant in which larvae produce secretions from a ventral tubercle that are consumed by adults, representing an unusual form of larva-to-adult trophallaxis. Stigmatomma oregonense, a North American "dracula ant," feeds non-lethally on larval haemolymph. Using PacBio HiFi long-read sequencing, we assembled the P. mocquerysi genome (187 Mb, 307 scaffolds, N50 = 5.26 Mb, BUSCO 99.2% complete) and the S. oregonense genome (262 Mb, 1,189 scaffolds, N50 = 0.84 Mb, BUSCO 98.3% complete). These genomes encode 10,860 and 12,354 protein-coding genes, respectively. Repeat content is higher in S. oregonense than in P. mocquerysi, 54.3% against a lower bound of 15.7%. Most of the difference is in unclassified repeats, which we show to be diverged transposable elements. Comparative analysis with two additional poneroid genomes from closely related species reveals that genome size variation across poneroid ants is largely explained by transposable element dynamics, with notable expansions in several gene families including carboxylesterases, serine proteases, and lipid metabolism genes in Amblyoponinae. These genomes provide essential resources for investigating the molecular basis of unconventional brood management strategies in ants.

genomics↗

bioRxiv2026

Using semi-folded arenas to observe spontaneous emergence of collective trails in whole colonies of termites

Collective movement in social organisms emerges from local interactions and can generate large-scale spatial patterns of ecological relevance. In termites, trail formation is a well-known collective phenomenon, yet reproducing and recording its emergence under controlled laboratory conditions using whole colonies remains challenging. Existing laboratory approaches often rely on confined arenas or manually assembled subgroups, which can restrict movement and limit observation of colony-level dynamics. Here, we present a semi-folded arena designed for whole-colony observation of termite movement under controlled conditions. We developed a circular semi-folded arena that remained continuously connected to an intact nest and allowed individuals to move across a central observation surface while recirculating through a folded peripheral section. Using whole colonies of the Neotropical termite Constrictotermes cyphergaster, we recorded exploratory activity under baseline conditions, in the absence of added food or water. High-resolution video recordings were analysed using automated movement extraction to recover trajectories and visualise collective trail structure. Within the first 6 min of activity, collective trail structure was observed in 15 of the 16 colonies analysed. Under these conditions, the semi-folded setup captured early collective trail structure, visible as convergence of cumulative trajectories along shared routes radiating from the arena entrance region. Automated movement extraction was compatible with dense whole-colony recordings and yielded large quantities of positional data during the initial observation interval. Descriptive trajectory-based outputs, including speed distributions for workers and soldiers, showed that the recordings were suitable for recovery of fine-scale movement information. Repeatedly used routes were also often marked by visible dark traces on the paper lining by the end of the observations, providing a qualitative record of cumulative route use. The semi-folded arena provides a practical method for recording whole-colony termite movement under laboratory conditions while maintaining continuous nest access and avoiding manual transfer of individuals during trials. Rather than replacing conventional arena designs, this approach offers an additional methodological option for studying emergent movement patterns in species for which whole-colony observation is feasible. More broadly, it expands the experimental toolkit available for investigating colony-scale spatial organisation under controlled conditions.

ecology↗

bioRxiv2019

ADCK4 deficiency destabilizes the coenzyme Q complex, which is rescued by 2,4-dihydroxybenzoic acid treatment

ADCK4 mutations usually manifest as steroid-resistant nephrotic syndrome, and cause coenzyme Q10 (CoQ10) deficiency. However, the function of ADCK4 remains obscure. We investigated ADCK4 function using mouse and cell models. Podocyte-specific Adck4 deletion in mice significantly reduced survival and caused severe focal segmental glomerular sclerosis with extensive interstitial fibrosis and tubular atrophy, which were prevented by treatment with 2,4-dihydroxybenzoic acid (2,4-diHB), an analog of CoQ10 precursor molecule. ADCK4 knockout podocytes exhibited significantly decreased CoQ10 level, respiratory chain activity, mitochondrial potential, and dysmorphic mitochondria with loss of cristae formation, which were rescued by 2,4-diHB treatment, thus attributing these phenotypes to decreased CoQ10 levels. ADCK4 interacted with mitochondrial proteins including COQ5, and also cytoplasmic proteins including myosin and heat shock proteins. ADCK4 knockout decreased COQ complex levels, and the COQ5 level was rescued by ADCK4 overexpression in ADCK4 knockout podocytes. Overall, ADCK4 is required for CoQ10 biosynthesis and mitochondrial function in podocytes.

genetics↗

bioRxiv2019

Peaceful behaviour: a strategy employed by an obligate nest invader to avoid conflict with its host species

In addition to its builders, termite nests are known to house a variety of secondary, opportunistic termite species, but little is known about the mechanisms governing the maintenance of such associations. In a single nest, host and intruder are likely to engage in intense conflict, due to their nestmate discrimination system. An intriguing question is how individuals cope with such a burden in the long term. Evasive behaviour has been previously suggested as a mechanism that reduces the frequency of encounters between non-nestmates. However, due to confinement imposed by the nests physical boundaries, it is likely that hosts and inquilines would eventually come across each other. Under these circumstances, it is plausible that inquilines would be required to behave accordingly to secure their housing. Here, we tested this hypothesis predicting that, once inevitably exposed to hosts, inquiline individuals would modulate their behaviour to circumvent conflict. While exploring the behavioural dynamics of the encounter between both cohabitants, we find evidence for an unusual lack of aggressiveness by inquilines towards hosts. Such a non-aggressive behaviour is characterised by evasive manoeuvres that include reversing direction, bypassing and a defensive mechanism using defecation to repel hosts. The behavioural adaptations we describe may play an intrinsic role in the stability of cohabitations between termite species: by reducing the costs of conflicts to both cohabitants, it may improve the chances for stable nest-sharing considerably.

animal behavior and cognition↗