bioRxiv Science⌕ Search

Biology subjects

Houben, A. M.

Publications and source records attributed to Houben, A. M..

2 recordsLinked to original sources

Modular architecture confers robustness to damage and facilitates recovery in spiking neural networks modeling in vitro neurons

Impaired brain function is restored following injury through dynamic processes that involve synaptic plasticity. This restoration is supported by the brains inherent modular organization, which promotes functional separation and redundancy. However, it remains unclear how the modular structure interacts with synaptic plasticity, most notably in the form of spike-timing-dependent plasticity (STDP), to define the damage response and recovery efficiency. In this work, we numerically modeled the response and recovery to damage of a neuronal network in vitro bearing a modular structure. Consistent with the in vitro observations, the in silico numerical model effectively captured the decline and subsequent recovery of spontaneous activity following the injury. We revealed that the modular structure confers robustness to injury, minimizes the decrease in neuronal activity, and promotes recovery via STDP. Finally, using the reservoir computing framework, we show that information representation in the neuronal network improves with the recovery of synchronous activity. Our work provides an experimental-numerical platform for predicting recovery in damaged neuronal networks and may help developing effective models for brain injury.

neuroscience↗

Rich dynamics and functional organization on topographically designed neuronal networks in vitro

Neuronal cultures are a prominent experimental tool to understand complex functional organization in neuronal assemblies. However, neurons grown on flat surfaces exhibit a strongly coherent bursting behavior with limited functionality. To approach the functional richness of naturally formed neuronal circuits, here we studied neuronal networks grown on polydimethylsiloxane (PDMS) topographical patterns shaped as either parallel tracks or square valleys. We followed the evolution of spontaneous activity in these cultures along 20 days in vitro using fluorescence calcium imaging. The networks were characterized by rich spatiotemporal activity patterns that comprised from small regions of the culture to its whole extent. Effective connectivity analysis revealed the emergence of spatially compact functional modules that were associated to both the underpinned topographical features and predominant spatiotemporal activity fronts. Our results show the capacity of spatial constraints to mold activity and functional organization, bringing new opportunities to comprehend the structure-function relationship in living neuronal circuits.

bioengineering↗