bioRxiv Science⌕ Search

Biology subjects

Hollocher, H.

Publications and source records attributed to Hollocher, H..

2 recordsLinked to original sources

Contrasting Impacts of the Anthropogenic Environment on the Diet of Long-tailed Macaques (Macaca fascicularis) in Southeast Asia

Human expansion will only increase access to anthropogenic food resources for wildlife species. Access to these resources can have positive and negative impacts on wildlife species. It is generally assumed that access to anthropogenic resources will decrease diet diversity, although recent work questions this. Our research uses metabarcoding to assess the diet detected in fecal samples from long-tailed macaques (Macaca fascicularis) on the islands of Singapore and Bali, Indonesia. We gathered information about multiple parameters to characterize the distinctly different anthropogenic environments on the two islands. Then, we used a leave one out cross validation model selection procedure and linear regressions to determine which environmental parameters impact various diet metrics for the macaques in these two different anthropogenic contexts. Macaques in both island contexts increased their usage of crop diet items with greater anthropogenic access, but with different resulting patterns. We found that as food provisioning of the macaques increases in Bali, multiple measures of diet richness decrease, as generally expected, yet diet stability within a group also decreases, indicating that although diet richness decreases with provisioning, individuals do not experience similar levels of access to these resources. In contrast to Bali, there were no significant differences in diet stability across groups in Singapore with increases in anthropogenic resources. These differing impacts on diet, seen in a single species, highlight the need to consider more closely the details of the spatial and temporal distribution of anthropogenic resource access when making predictions about how a species diet will be impacted.

ecology↗

Characterizing Bacterial and Archaeal Microbiomes of Urban Long-Tailed Macaques in Singapore

Animal microbiomes are sources of ecological responsiveness in the face of environmental change, and may serve as modulators and indicators of adaptability and stress in the face of emerging ecological perturbations. Baseline characterizations of non-human primate microbiomes will be important to applied and theoretical applications of microbiome research. Long-tailed macaques (Macaca fasciularis) are among the most ubiquitous primates, they live in close association with humans, and are a common model organism in biomedical research. Here, we use 16S amplicon metabarcoding of the V4 hypervariable region to provide baseline information on taxonomic and inferred functional variation in the prokaryotic (Archaea and Eubacteria) assemblies of oral and gut microbiomes of urban long-tailed macaques in Singapore. Oral microbiomes showed the most pronounced community structure at lower taxonomic levels, particularly ASVs. Gut microbiomes, in contrast, showed the most pronounced community structure at higher taxonomic levels, particularly phyla. Gut microbiomes showed clear groupings based on relative abundances of Proteobacteria, Firmicutes, and Bacteroidetes. Gut microbiome community composition was almost entirely explained by the Proteobacteria:Firmicutes ratio and this metric explained twice as much inferred functional variation as the more traditional Firmicutes:Bacteroidetes ratio. Archaeal communities in both oral and gut communities were dominated by methanogens. These were the only archaea found in the gut, but ammonia-oxidizing archaea were consistent constituents of oral microbiome assemblies as well. Ultimately, our findings imply distinct microbiome composition in Singapores urban macaques relative to reports from non-urban conspecifics.

microbiology↗