Biology subjects

Herrmann, M. H.

Publications and source records attributed to Herrmann, M. H..

3 recordsLinked to original sources

bioRxiv2025

Partial cross-resistance of oats to different Fusarium species and the role of trichomes in susceptibility

Resistance of oats to FHB, caused by different Fusarium species, is important for grain quality and yield. In this study, 25 oat genotypes were evaluated for resistance to Fusarium graminearum (FG), F. sporotrichioides (FS) and F. poae (FP) in field trials across Germany to assess the presence of cross-resistance and to analyse the role of trichomes on the hulls during Fusarium infection. Infection severity was quantified by Fusarium species-specific qPCR and showed the highest fungal biomass for FP, followed by FS and FG. Variability due to environmental effects was very high, resulting in rather low heritabilities for FG (0.50) and FS (0.36), and no significant genotype effect for FP. A significant positive correlation was found between FP and FS infection, whereas FG infection was not correlated with either FP or FS. Microscopic analyses revealed important genotype-specific differences in trichome size and density on lemma and palea with very high heritability (0.97). FG biomass was positively correlated with trichome size and density, and FG hyphae were observed in close interaction with trichomes and stomata. These results indicate the presence of partial cross-resistance in addition to mostly species-specific resistance and suggest a role for trichomes in susceptibility to FG.

plant biology↗

bioRxiv2024

A pangenome and pantranscriptome of hexaploid oat

Oat grain is a traditional human food rich in dietary fiber that contributes to improved human health. Interest in the crop has surged in recent years owing to its use as the basis for plant-based milk analogs. Oat is an allohexaploid with a large, repeat-rich genome that was shaped by subgenome exchanges over evolutionary timescales. In contrast to many other cereal species, genomic research in oat is still at an early stage, and surveys of structural genome diversity and gene expression variability are scarce. Here, we present annotated chromosome-scale sequence assemblies of 33 wild and domesticated oats along with an atlas of gene expression across six tissues of different developmental stages in 23 accessions. We describe the interplay of gene expression diversity across subgenomes, accessions and tissues. Gene loss in the hexaploid is accompanied by compensatory up-regulation of the remaining homeologs, but this process is constrained by subgenome divergence. Chromosomal rearrangements have significantly impacted recent oat breeding. A large pericentric inversion associated with early flowering explains distorted segregation on chromosome 7D and a homeologous sequence exchange between chromosomes 2A and 2C in a semidwarf mutant has risen to prominence in Australian elite varieties. The oat pangeome will promote the adoption of genomic approaches to understanding the evolution and adaptation of domesticated oats and will accelerate their improvement.

genomics↗

bioRxiv2024

Genetic mapping of the powdery mildew resistance gene Pm13 on oat chromosome 1D

Powdery mildew, caused by the biotrophic fungus Blumeria graminis DC. f. sp. avenae, is a widespread disease of oats, especially in the temperate regions of Western and Central Europe, and the use of resistant varieties is the most sustainable way to ensure stable yields. Therefore, the identification of robust and effective resistance to powdery mildew is of great interest for oat breeding. In contrast to race-specific resistance genes, adult plant resistance (APR) is generally considered to be more durable. The oat variety Firth, as well as related varieties such as Husky or Flamingstip, contains an unknown APR gene, which was previously located on chromosome 1D using DArT markers. The aim of this study was to confirm and refine the chromosomal location of this resistance gene, tentatively named Pm13. To this end, two independent experiments were carried out using different genetic material under natural infection conditions in the field: genome-wide association mapping (GWAS) in a diverse set of 250 oat lines grown in ten environments and QTL mapping in a HuskyxAVE1284 bi-parental population grown in three environments. Both approaches identified a QTL for powdery mildew resistance on the distal end of chromosome 1D in the hexaploid Sang oat genome. The locus explained up to 15 % of the phenotypic variance in GWAS and 64 % of the phenotypic variance in QTL mapping. Comparison of field data with results from laboratory leaf segment tests confirmed that Pm13 does indeed confer APR. The sequence information of the identified linked markers may allow the development of molecular markers useful for early selection of oat lines with high levels of APR.

plant biology↗