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Hauk, V. J.

Publications and source records attributed to Hauk, V. J..

2 recordsLinked to original sources

Genomic and physiological analyses reveal that extremely thermophilic Caldicellulosiruptor changbaiensis deploys unique cellulose attachment mechanisms

The genus Caldicellulosiruptor are extremely thermophilic, heterotrophic anaerobes that degrade plant biomass using modular, multifunctional enzymes. Prior pangenome analyses determined that this genus is genetically diverse, with the current pangenome remaining open, meaning that new genes are expected with each additional genome sequence added. Given the high biodiversity observed among the genus Caldicellulosiruptor, we have sequenced and added a 14th species, Caldicellulosiruptor changbaiensis, to the pangenome. The pangenome now includes 3,791 ortholog clusters, 120 of which are unique to C. changbaiensis and may be involved in plant biomass degradation. Comparisons between C. changbaiensis and Caldicellulosiruptor bescii on the basis of growth kinetics, cellulose solubilization and cell attachment to polysaccharides highlighted physiological differences between the two species which are supported by their respective gene inventories. Most significantly, these comparisons indicated that C. changbaiensis possesses unique cellulose attachment mechanisms not observed among the other strongly cellulolytic members of the genus Caldicellulosiruptor.

microbiology

Caldicellulosiruptor bescii regulates pilus expression in response to the polysaccharide, xylan

Biological hydrolysis of cellulose above 70{degrees}C involves microorganisms that secrete free enzymes, and deploy separate protein systems to adhere to their substrate. Strongly cellulolytic Caldicellulosiruptor bescii is one such extreme thermophile, which deploys modular, multi-functional carbohydrate acting enzymes to deconstruct plant biomass. Additionally, C. bescii also encodes for non-catalytic carbohydrate binding proteins, which likely evolved as a mechanism to compete against other heterotrophs in carbon limited biotopes that these bacteria inhabit. Analysis of the Caldicellulosiruptor pangenome identified a type IV pilus (T4P) locus encoded upstream of the t[a]pirins, that is encoded for by all Caldicellulosiruptor species. In this study, we sought to determine if the C. bescii T4P plays a role in attachment to plant polysaccharides. The major C. bescii pilin (CbPilA) was identified by the presence of pilin-like protein domains, paired with transcriptomics and proteomics data. Using immuno-dot blots, we determined that the plant polysaccharide, xylan, induced production of CbPilA 10 to 14-fold higher than glucomannan or xylose. Furthermore, we are able to demonstrate that recombinant CbPilA directly interacts with xylan, and cellulose at elevated temperatures. Localization of CbPilA at the cell surface was confirmed by immunofluorescence microscopy. Lastly, a direct role for CbPilA in cell adhesion was demonstrated using recombinant CbPilA or anti-CbPilA antibodies to reduce C. bescii cell adhesion to xylan and crystalline cellulose up to 4.5 and 2-fold, respectively. Based on these observations, we propose that CbPilA and by extension, the T4P, plays a role in Caldicellulosiruptor cell attachment to plant biomass. IMPORTANCEMost microorganisms are capable of attaching to surfaces in part to persist in their environment. Here, we describe that the thermophilic, plant degrading bacterium, Caldicellulosiruptor bescii, uses type IV pili to attach to carbohydrates found in plant biomass. This ability is likely key to survival in environments where carbon sources are limiting, allowing C. bescii to compete against other plant degrading microorganisms. Interestingly, the carbohydrate that induced the highest expression of pilin protein was xylan, a hemicellulose that is not the majority polysaccharide in plant biomass. Not only do we demonstrate a direct interaction of the pilin with the polysaccharides, but also that cell attachment to polysaccharides can be disrupted by the addition of recombinant pilin and notably by antibody neutralization of the native pilin. This mechanism mirrors those recently described in pathogenic Gram-positive bacteria, and further supports the ancient origins of type IV pilus systems.

microbiology