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Biology subjects

Han, X. Y.

Publications and source records attributed to Han, X. Y..

2 recordsLinked to original sources

A direct comparison of four high risk human papilloma virus tests versus the cobas test for detecting cervical intraepithelial neoplasia and cervical cancer

This study is to evaluate performances and genotyping capabilities of four human papilloma virus (HR-HPV) tests based on real-time polymerase chain reaction (PCR) technology platforms compared with the cobas test. Discordant results were further analyzed using INNO-LiPA HPV genotyping test, the gold standard laboratory test to determine presence and type of HPV infection. Over 200 samples from Hospital patients were collected and analyzed using five HR-HPV tests. Women with positive test results were referred directly to colposcopy. If a positive result was returned, biopsies were administered for pathological classification. Clinical performances and genotyping capabilities between the four HR-HPV and cobas tests were compared and contrasted. High levels of agreement were observed, though all HR-HPV tests presented discrepancies compared with the cobas test. Cervical intraepithelial neoplasia Grade 2 or higher lesions (CIN2+) was set as the threshold, and all five tests performed with equally high sensitivity. Lower levels of specificity were observed across all five tests. Results suggest the four HR-HPV tests analyzed are as effective as the cobas test in genotyping capacities and diagnosing CIN. Therefore, these test kits should be used for HPV screening, especially in developing nations because they are cost effective and reliable. Minor discrepancies between tests are generally unavoidable though this may add complexity to the clinical decision-making process. As such, we recommend that efforts be made to standardize HPV genotyping tests as well as to optimize clinical sensitivity and specificity. Focusing on these issues will drive the development of HPV detection techniques, therefore save lives.

epidemiology

Cultivation of 146 Clinical Strains of Nocardia species

Nocardia species generally grow well on culture media in contrast to limited metabolic activities. Yet there are rare studies that have examined systematically the effect of culture media on the clinical recovery of these Gram-positive branching bacilli, particularly in relation to many recently described or revised Nocardia species. We analyzed 146 clinical Nocardia strains, of 24 species, recovered at the University of Texas M. D. Anderson Cancer Center from 2002-2018 for their growth on culture media. Among media setups to culture routine bacteria, fungi, and acid-fast bacilli (AFB), the AFB media alone recovered 35 strains as did fungal media with 26 strains and routine media with 10 strains. Seventy five strains were recovered on two and three media setups. On AFB media most Nocardia nova strains (24 of 29) grew, significantly more than all other strains did. Likewise, all four strains of Nocardia mikamii were cultivated solely on AFB media. Fungal media yielded all six strains of Nocardia wallacei that were resistant to tobramycin and/or amikacin; this growth could be explained by the presence of gentamycin in one fungal medium. Specimen source also affected the recovery: more Nocardia strains grew on every media setup from normally sterile specimens than from nonsterile specimens. These results suggest that diverse culture media support the growth of many Nocardia species. The better recoveries of these organisms from AFB media and fungal media are likely attributable to decontamination of specimens on AFB culture, incorporation of selective antimicrobial agents into the media, and prolonged incubation.

microbiology