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Guillemette, F.

Publications and source records attributed to Guillemette, F..

2 recordsLinked to original sources

Lake floodplains as sinks for stable soil organic carbon: is the carbon plant- or microbe-derived, and why does permanent land use matter?

Floodplain ecosystems play a key role in soil organic carbon (SOC) storage, as they integrate inputs from both vegetation and sediments. Promoting land uses with low anthropogenic disturbances helps maintain the function of these ecosystems as soil carbon (C) sinks. However, the tipping points along a disturbance gradient where land use transitions generate the largest SOC losses or gains remain unclear, though they are key for effective land use management and climate change mitigation. Because flood events can negatively impact labile C, determining the main origin of stable SOC, whether from plants or soil microorganisms, is also important to identify the optimal combination of land use, vegetation, and soil type for SOC stabilization in floodplains. We examined how SOC storage and stabilization vary in the floodplain of Lake Saint-Pierre, Quebec, Canada along an anthropogenic disturbance gradient of six land uses: conventional and improved croplands, temporary and permanent meadows, marshes, and forested swamps. In all 6 land uses, we quantified SOC stocks, mineral-associated organic matter - C (MAOM-C), particulate organic matter - C (POM-C), soil {delta}13C and sugars. Land use effects on SOC storage and stabilization were most pronounced in the topsoil (0-10 cm), with forested swamps showing the highest vegetation biomass, SOC, and MAOM-C. Microbe-derived inputs were more abundant in MAOM, whereas plant-derived C dominated POM. SOC gains increased with decreasing disturbance, with a tipping point occurring in the transition from temporary to permanent meadows. Our results highlight the importance of conserving permanent and low-disturbance land uses to promote SOC persistence in floodplain ecosystems and emphasize the central role of microbial metabolism in stabilization processes.

ecology↗

Differential alteration of plant functions by homologous fungal candidate effectors

Rust fungi are plant pathogens that cause epidemics that threaten the production of important plant species, such as wheat, soy, coffee and poplar. Melampsora larici-populina (Mlp) causes the poplar rust and encodes at least 1 184 candidate effectors (CEs), however their functions are poorly known. In this study, we used Arabidopsis plants constitutively expressing CEs of Mlp to discover processes targeted by these fungal proteins. For this purpose, we sequenced the transcriptome and used mass spectrometry to analyse the metabolome of Arabidopsis plants expressing individually one of the 14 selected CEs and of a control line. We found 2 299 deregulated genes across the experiment. Among the down-regulated genes, the KEGG pathways "MAPK signaling pathway" and "Plant-pathogen interaction" were respectively over-represented in six and five of the 14 transgenic lines. Moreover, genes related to hormone response and defense were down-regulated across all transgenic lines are. We further observed that there were 680 metabolites deregulated in at least one CE-expressing transgenic line, with highly unsaturated and phenolic compounds enriched in up-regulated metabolites and peptides enriched among down-regulated metabolites. Interestingly, we found that transgenic lines expressing unrelated CEs had correlated patterns of gene and metabolite deregulation, while expression of CEs belonging to the same family deregulated different genes and metabolites. Taken together, our results indicate that the sequence of effectors and their belonging to families may not be a good predictor of their impact on the plant. ImportanceRust fungi are plant pathogens that threaten the production of important crops, including wheat, soy, coffee and poplar. Effectors are used by pathogens to control the host, however in the case of Melampsora larici-populina, the causal agent of the poplar rust, and other rust fungi these proteins are poorly known. We used Arabidopsis plants expressing candidate effectors (CEs) of Mlp to better understand the interaction between this pathogen and its hosts. We found that expression of unrelated CEs led to similar patterns of gene and metabolite deregulation, while transgenic lines expressing CEs belonging to the same family showed different groups of different genes and metabolites deregulated. Thus, our results suggest that functional annotation of effectors based on sequence similarity may be misleading.

plant biology↗