Biology subjects

Guidotti, R.

Publications and source records attributed to Guidotti, R..

5 recordsLinked to original sources

bioRxiv2025

Predictive modeling of TMS-evoked responses: Unraveling instantaneous excitability states

Transcranial magnetic stimulation (TMS) combined with electroencephalography (EEG) and electromyography (EMG) provides a unique window into instantaneous cortical and corticospinal excitability states. We investigated 50 healthy participants to determine how fluctuations in pre-stimulus brain activity influence single-trial TMS-evoked potentials (TEPs) and motor-evoked potentials (MEPs). We developed a novel automated source-level TEP extraction method using individualized spatiotemporal priors that is robust against poor single-trial signal-to-noise ratios (SNRs) and ongoing oscillations. TEP and MEP amplitudes were predicted with linear mixed-effects models based on pre-stimulation EEG band-powers (theta to gamma), while accounting for temporal drifts (within-session trends), coil control, and inter-subject differences. We found that higher pre-stimulus sensorimotor alpha, beta, and gamma power were each associated with larger TEPs, indicating a more excitable cortical state. Increases in alpha and gamma power immediately before stimulation specifically predicted larger MEPs, reflecting increased corticospinal excitability. These results reveal relationships between ongoing oscillatory brain states and TMS response amplitudes, identifying EEG biomarkers of high- and low-excitability states. In conclusion, our study demonstrates the feasibility of single-trial source-level TMS-EEG analysis and shows that spontaneous alpha-, beta-, and gamma-band oscillations modulate motor cortical and corticospinal responsiveness. These findings pave the way for EEG-informed, brain-state-dependent TMS protocols to optimize neuromodulatory interventions in clinical and research applications.

neuroscience↗

bioRxiv2025

NeuroSimo: an open-source software for closed-loop EEG- or EMG-guided TMS

ObjectiveOur goal was to create open-source software for closed-loop EEG-TMS that allows researchers to rapidly prototype and develop novel stimulation paradigms in a high-level programming language. This addresses the limitations of current solutions, which often rely on proprietary hardware and software, limiting their accessibility and customizability, or comprise ad-hoc pipelines tailored to specific use cases. ApproachWe developed NeuroSimo, a software platform that enables arbitrary EEG-TMS stimulation protocols written in Python, leveraging Pythons ecosystem of scientific, neuroimaging, and machine learning libraries. The core software is written in C++ with an embedded Python interpreter and employs the Robot Operating System (ROS 2) for inter-process communication. NeuroSimo runs on real-time-enabled Linux Ubuntu, using LabJack T4 for pulse triggering, and supports two EEG device models (Bittium NeurOne, BrainProducts actiCHamp) and TMS devices that deliver pulses via trigger signals. The software includes a graphical user interface for configuration and performance monitoring, and supports GPU processing for neural network computations. Main resultsIn brain-state-dependent stimulation using the Phastimate algorithm, which targets TMS pulses to the trough of sensorimotor -rhythm, NeuroSimo achieved a median timing error of 0.2 ms (95% CI: 0.2-0.2 ms), a 99th-percentile of 0.6 ms (0.6-0.6 ms), and a maximum of 1.4 ms. SignificanceAs an open-source platform combining Pythons flexibility with real-time closed-loop EEG-TMS, NeuroSimo enables researchers to develop and implement novel therapeutic approaches, marking a significant advance in personalized brain stimulation.

bioengineering↗

bioRxiv2025

Meditation induces shifts in neural oscillations, braincomplexity and critical dynamics: Novel insights fromMEG

While the beneficial impacts of meditation are increasingly acknowledged, its underlying neural mechanisms remain poorly understood. We examined the electrophysiological brain signals of expert Buddhist monks during two established meditation methods known as Samatha and Vipassana, which employ focused attention and open monitoring technique. By combining source-space magnetoencephalography (MEG) with advanced signal processing and machine learning tools, we provide an unprecedented assessment of the role of brain oscillations, complexity and criticality in meditation. In addition to power spectral density (PSD), we computed long-range temporal correlations (LRTC), deviation from criticality coefficient (DCC), Lempel-Ziv complexity (LZC), 1/f slope, Higuchi fractal dimension (HFD), and spectral entropy. Our findings indicate increased levels of neural signal complexity during both meditation practices compared to the resting state, along-side widespread reductions in gamma-band LRTC and 1/f slope. Importantly, the DCC analysis revealed a separation between Samatha and Vipassana, suggesting that their distinct phenomenological properties are mediated by specific computational characteristics of their dynamic states. Furthermore, in contrast to most previous reports, we observed a decrease in oscillatory gamma power during meditation, a divergence we attribute to the correction of the power spectrum by the 1/f slope. We discuss how these results advance our comprehension of the neural processes associated with focused attention and open monitoring meditation practices.

neuroscience↗

bioRxiv2023

Intrinsic motor network connectivity predicts corticospinal excitability

State-dependent non-invasive brain stimulation (NIBS) informed by electroencephalography (EEG) has contributed to the understanding of NIBS inter-subject and inter-session variability. While these approaches focused on local EEG characteristics, it is acknowledged that the brain exhibits an intrinsic long-range dynamic organization in networks. This proof-of-concept study explores whether EEG connectivity of the primary motor cortex (M1) in the pre-stimulation period aligns with the motor network (MN) and how MN state affects responses to transcranial magnetic stimulation (TMS) of M1. One thousand suprathreshold TMS pulses were delivered to left M1 in 8 subjects at rest, with simultaneous EEG. Motor evoked potentials (MEPs) were measured from the right hand. Source-space functional connectivity of left M1 to the whole-brain was assessed using the imaginary part of the Phase Locking Value at the frequency of the sensorimotor {micro}-rhythm in a 1-second window before the pulse. Group-level connectivity revealed functional links between left M1, left supplementary motor area, and right M1. Also, pulses delivered at high MN connectivity states result in a greater MEP amplitude compared to low connectivity states. At single-subject level, this relation is more expressed in subjects that feature an overall high cortico-spinal excitability. In conclusion, this study paves the way for MN connectivity based NIBS. HighlightsO_LIEEG pre-stimulus connectivity of left M1 largely corresponds to the motor network C_LIO_LIStronger motor network (MN) connectivity corresponds to greater MEP amplitudes C_LIO_LILinear regression models based on MN connectivity predicts MEP amplitude C_LI

neuroscience↗

bioRxiv2019

Disentangling functional connectivity effects of age and expertise in long-term meditators

The effects of intensive meditation practices on the functional and structural organization of the human brain have been addressed by a growing number of neuroscientific studies. However, the different modulations of meditation expertise and of ageing, in the underlying brain areas and networks, have not yet been fully elucidated. These effects should be distinguished in order to clarify how long-term meditation can modulate the connectivity between brain areas. To address this issue, we tested whether meditation expertise and age can be predicted from the multivariate pattern of functional Magnetic Resonance Imaging connectivity, in Theravada Buddhist monks with long-term practice in two different meditation forms: Focused Attention (FA) and Open Monitoring (OM). We found that functional connectivity patterns in both meditation forms can be used to predict expertise and age of long-term meditators. Our findings suggest that meditation expertise is associated with meditation-specific brain networks modulations, while age-related modifications are general and independent from the meditation type. Specifically, expertise modulated patterns during FA meditation include nodes and connections implicated in focusing, sustaining and monitoring attention, while the predictive patterns during OM meditation include nodes associated with cognitive and affective monitoring. Thus, the two forms of meditation may differentially contribute to counteract the effects of neurocognitive decline with ageing by neuroplasticity of brain networks.

neuroscience↗