Biology subjects

Guessous, I.

Publications and source records attributed to Guessous, I..

4 recordsLinked to original sources

bioRxiv2024

Immune escape of Omicron lineages BA.1, BA.2, BA.5.1, BQ.1, XBB.1.5, EG.5.1 and JN.1.1 after vaccination, infection and hybrid immunity

In the 5th year after the emergence of SARS-CoV-2, Omicron lineages continue to evolve and cause infections. Here, we used eight authentic SARS-CoV-2 isolates to assess their capacity to escape immunity of different exposure histories and their replicative capacity in polarized human airway epithelial cells (HAE) derived from the nasal and bronchial epithelium. Using live-virus neutralization assays of 108 human sera or plasma of different immunological backgrounds, progressive immune escape was observed from B.1 (ancestral virus) to EG.5.1, but no significant difference between EG.5.1 and JN.1.1. Vaccinated individuals without natural infection and individuals with a single infection, but no vaccination showed markedly reduced or completely lost neutralization against the latest variants, while in those with hybrid immunity almost all sera showed some neutralization capacity. Furthermore, although absolute titers differed between groups, the pattern of immune escape between the variants remains comparable with strongest loss of neutralization observed for the latest variants. In vitro studies with HAE at 33{degrees}C and 37{degrees}C showed some, but minor differences in virus replication and innate immune responses upon infection. Notably, infection with XBB.1.5, EG.5.1 and JN.1.1 showed slightly increased viral growth in nasal HAE at 33{degrees}C. Altogether, these data underscore increasing immune escape across heterogeneous immunological backgrounds with gradually increasing antibody escape of evolving Omicron lineages until variant EG.5.1, but not any further for the latest dominant lineage JN.1.1. They also suggest that viral dynamics within Omicron lineages are driven by a combination of immune evasion and increase in viral replication.

microbiology↗

bioRxiv2019

Dietary intake and diet quality of Swiss adult survivors of childhood cancer compared to the general population

BackgroundChildhood cancer survivors (CCSs) are at increased risk of developing chronic health conditions, which may be reduced by following a healthy lifestyle including a good diet. ObjectivesThis study compared the dietary intake and quality of CCSs and the general population. DesignAs part of the Swiss Childhood Cancer Survivor Study, we sent a food frequency questionnaire (FFQ) to CCSs who had a median age of 34 years (IQR: 29-40 years) and a median of 26 years (20-31 years) postdiagnosis at the time of survey. We compared dietary intake and quality of CCSs and three comparison groups representing the general adult population using FFQ and 24h recall data (24HDR). We evaluated whether mean individual intake met national dietary recommendations and used the Alternative Healthy Eating Index (AHEI) to estimate diet quality. ResultsThe 774 CCSs in our study were compared to 8964 participants in the Bus Sante study, 1276 participants in the CoLaus study, and 1134 participants in the Swiss National Nutrition Survey. Dietary intake was equally poor in CCSs and the general Swiss population. CCSs consumed inadequate amounts of vitamin D, fiber, carbohydrates, iron, vitamin A, and calcium (12%, 41%, 72%, 72%, 79%, and 89% of the recommended intakes, respectively), and excessive amounts of saturated fat, protein, cholesterol, and total fat (137%, 126%, 114%, and 107% of the recommended intakes). The mean AHEI score in CCSs was low at 48.0 (men: 45.0, women: 50.9) out of a maximum score of 100. The general population, assessed by 24HDR, scored lower overall than CCSs (41.5; men: 38.7, women: 43.8). Clinical characteristics were not associated with diet quality in CCSs. ConclusionLong-term CCSs and the general adult population have similarly poor dietary intake and quality in Switzerland, which suggests population-based interventions for everyone.

epidemiology↗

bioRxiv2018

Spatial distribution of mammography adherence in a Swiss urban population and its association with socioeconomic status

PurposeLocal physical and social environment has a defining influence on individual behaviour and health-related outcomes. However, it remains undetermined if its impact is independent of individual socioeconomic status. In this study, we evaluated the spatial distribution of mammography adherence in the state of Geneva (Switzerland) using individual-level data and assessed its independence from socioeconomic status (SES).\n\nMethodsGeo-referenced individual-level data from the population-based cross-sectional Bus Sante study (n = 5,002) were used to calculate local indicators of spatial association (LISA) and investigate the spatial dependence of mammography adherence. Spatial clusters are reported without adjustment; adjusted for neighbourhood income and individual educational attainment; and demographic factors (age and Swiss nationality). The association between adjusted clusters and the proximity to the nearest screening centre was also evaluated.\n\nResultsMammography adherence was not randomly distributed throughout Geneva with clusters geographically coinciding with known SES distributions. After adjustment for SES indicators, clusters were reduced to 56.2% of their original size (n = 1,033). Adjustment for age and nationality further reduced the number of individuals exhibiting spatially dependent behaviour (36.5% of the initial size). The identified SES-independent hot spots and cold-spots of mammography adherence were not explained by proximity to the nearest screening centre.\n\nConclusionsSES and demographic factors play an important role in shaping the spatial distribution of mammography adherence. However, the spatial clusters persisted after confounder adjustment indicating that additional neighbourhood-level determinants could influence mammography adherence and be the object of targeted public health interventions.

epidemiology↗

bioRxiv2018

Detecting overlapping spatial clusters of high sugar-sweetened beverage intake and high body mass index in a general population: a cross-sectional study

ObjectiveTo identify populations and areas presenting higher consumption of sugar-sweetened beverages (SSB) and their overlap with populations and areas presenting higher body mass index (BMI).\n\nDesignCross-sectional population-based study.\n\nSettingState of Geneva, Switzerland.\n\nParticipants15,767 non-institutionalized residents aged between 35 and 74 years (20 and 74 since 2011) of the state of Geneva, Switzerland.\n\nMain outcome measuresSpatial indices of sugar-sweetened beverage intake frequency and body mass index. Median regression analysis was used to control for characteristics of patients.\n\nResultsThe SSB intake frequency and the BMI were not randomly distributed across the state. Among the 15,423 participants retained for the analyses, 2,034 (13.2%) were within clusters of high SSB intake frequency and 1,651 (10.7%) was within clusters of low SSB intake frequency, 11,738 (76.1%) showed no spatial dependence. We also identified clusters of BMI, 4,014 (26.0%) participants were within clusters of high BMI and 3,591 (23.3%) were within clusters of low BMI, 7,818 (50.7%) showed no spatial dependence. We found that clusters of SSB intake frequency and BMI overlap in specific areas. 1,719 (11.1%) participants were within high SSB intake frequency and high BMI clusters. After adjustment for covariates (education level, gender, age, nationality, and the median income of the area), the identified clusters persisted and were only slightly attenuated.\n\nConclusionA fine-scale spatial approach allows identifying specific populations and areas presenting higher SSB consumption and, for some areas, higher SSB consumption associated with higher BMI. These findings could guide legislators to develop targeted interventions such as prevention campaigns and pave the way for precision public health.\n\nWhat is already known on this topicO_LIThe consumption of sugar-sweetened beverages (SSBs) is an important contributory factor of obesity and obesity-related diseases.\nC_LIO_LISSB consumption varies according to socioeconomic status, which could explain the higher prevalence of obesity in specific areas.\nC_LIO_LISSB taxation faces resistance in many countries due to its potential regressive nature.\nC_LI\n\nWhat this study addsO_LIThe spatial analysis of individual-level SSB consumption in the state of Geneva provides a clear identification of populations and areas presenting higher SSB consumption and, for some areas, higher SSB consumption along with higher body mass index (BMI).\nC_LIO_LIThe results demonstrate the persistence of SSB clustering in the geographic space after adjusting for education level, gender, nationality, age, and neighborhood-level median income.\nC_LIO_LIThe findings provide guidance for future public health interventions to reduce SSB consumption by better targeting vulnerable populations.\nC_LI

epidemiology↗