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Biology subjects

Gomes, G.

Publications and source records attributed to Gomes, G..

2 recordsLinked to original sources

Introducing risk inequality metrics in tuberculosis policy development

Global stakeholders including the World Health Organization rely on predictive models for developing strategies and setting targets for tuberculosis care and control programs. Failure to account for variation in individual risk leads to substantial biases that impair data interpretation and policy decisions1,2. Anticipated impediments to estimating heterogeneity for each parameter are discouraging despite considerable technical progress in recent years. Here we identify acquisition of infection as the single process where heterogeneity most fundamentally impacts model outputs, due to cohort selection imposed by dynamic forces of infection. Individuals with higher risk of acquiring infection are predominantly affected by the pathogen, leaving the unaffected pool with those whose intrinsic risk is lower. This causes susceptibility pools to attain average risks which are lower under higher forces of infection. Interventions that modify the force of infection change the strength of selection, and therefore alter average risks in the pools which feed further incidence. Inability to account for these dynamics is what makes homogenous models unsuitable. We introduce concrete metrics to approximate risk inequality in tuberculosis, demonstrate their utility in mathematical models, and pack the information into a risk inequality coefficient which can be calculated and reported by national tuberculosis programs for use in policy development and modeling.

epidemiology

Non-heritable variation in individual fitness adds stability to neutral theories in ecology and evolution

Neutral theories in ecology1 and evolution2 contend that high diversity of natural communities and high rates of molecular evolution conform to models where individuals have equal fitness and mutations have no effects. Demographic stochasticity makes community and population compositions inherently unstable under these models, with overall levels of diversity being maintained by random processes. This is in contrast with niche and adaptive theories which emphasize differences between species or genotypes as the key to their coexistence3. Here we show that non-heritable variation in individual fitness within species or genotypes can stabilize coexistence without evoking niche differentiation. We construct two classes of mathematical models based on experimental evidence: (1) bacterial growth with variation in cell longevity4,5; and (2) microbial transmission in a host population with variation in host susceptibility6-11. We find stable coexistence of 2 bacterial species in the first model under a single oscillating resource, and 3 or more in the second with independent distributions of host susceptibility to the various microbial species. We discuss the implications of these findings for the interpretation of common measures of relative fitness and for the maintenance of biodiversity.

ecology