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Gitanjali Yadav

Publications and source records attributed to Gitanjali Yadav.

2 recordsLinked to original sources

EVIDENCE FOR ALTERNATE STABLE STATES IN COLLAPSING ECOLOGICAL NETWORKS

BackgroundThere has been considerable interest and progress in our perception of organized complexity in recent years. Recurrent debates on the dynamics and stability of complex systems have enriched our understanding of these systems, but generalities in the relationship between structure and dynamics are hard to come by. Although traditionally an arena for theoreticians, much of this research has been invigorated by demonstration of the existence of alternate stable equilibria in real world ecosystems such as lakes, coral reefs, forests and grasslands.\n\nResultsLinking up systems thinking with recent advances in our understanding of ecological networks opens up exciting possibilities. In an attempt to obtain general patterns of behaviour of complex systems, we have analyzed the response of eighty-six real world ecological networks to targeted extinctions, and the findings suggest that most networks are robust to loss of specialists until specific thresholds are reached in terms of geodesics. If the extinctions persist, a state change or flip occurs and the structural properties are altered drastically, although the network does not collapse. Further, we find that as opposed to simpler networks, larger networks have several such alternate states that ensure their long-term persistence and that indeed complexity does endow resilience to such networks.\n\nConclusionsThis is the first report of critical transitions in ecological networks and the implications of these findings for complex systems characterized by networks are likely to be profound with immediate significance in conservation biology, invasion biology and restoration ecology.

Ecology

A genome wide dosage suppressor network reveals genetic robustness and a novel mechanism for Huntington’s disease

Mutational robustness is the extent to which an organism has evolved to withstand the effects of deleterious mutations. We explored the extent of mutational robustness in the budding yeast by genome wide dosage suppressor analysis of 53 conditional lethal mutations in cell division cycle and RNA synthesis related genes, revealing 660 suppressor interactions of which 642 are novel. This collection has several distinctive features, including high co-occurrence of mutant-suppressor pairs within protein modules, highly correlated functions between the pairs, and higher diversity of functions among the co-suppressors than previously observed. Dosage suppression of essential genes encoding RNA polymerase subunits and chromosome cohesion complex suggest a surprising degree of functional plasticity of macromolecular complexes and the existence of degenerate pathways for circumventing potentially lethal mutations. The utility of dosage-suppressor networks is illustrated by the discovery of a novel connection between chromosome cohesion-condensation pathways involving homologous recombination, and Huntingtons disease.

Genomics