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Giacomello, A.

Publications and source records attributed to Giacomello, A..

2 recordsLinked to original sources

Ca2+-calmodulin regulates Kv7.1 channel gating by allosterically interfering with its inactivation path

Like in many voltage-gated K+ channels (Kv), inactivation of the cardiac Kv7.1 channel is voltage-dependent but does not exhibit the hallmarks of N-type or C-type mechanisms. This peculiar inactivation is observed in wild-type channels and is exacerbated in many Kv7.1 mutations triggering cardiac arrhythmias. Previously, we showed that Kv7.1 inactivation could strikingly be prevented by Ca2+-calmodulin (Ca2+-CaM). Thus, how can Ca2+-CaM, localized at the channel inner boundaries, prevent inactivation that occurs distantly at the outer pore region and converges to the selectivity filter? Here, using network analysis, molecular dynamics simulations, and electrophysiology, we identify the inactivation paths coupling the voltage sensor domain to the selectivity filter, involving helices S1 and S6, and the P-Helix, which represents the underlying mechanism of Kv7.1 inactivation. Moreover, our data reveal the allosteric coupling mechanisms by which Ca2+-CaM signals interfere with the inactivation paths and prevent channel inactivation.

biophysics↗

Structural mechanisms of allosteric regulation in the human cis-prenyltransferase complex

Human cis-prenyltransferase (hcis-PT) synthesizes long-chain isoprenoids essential for N-linked protein glycosylation. This heteromeric complex comprises the catalytic subunit DHDDS and the regulatory Nogo-B receptor (NgBR). Although NgBR dramatically enhances DHDDS activity, the molecular basis for this allosteric regulation remains unclear. Here, we combined crystallography, hydrogen-deuterium exchange mass spectrometry (HDX-MS), molecular dynamics simulations, and network analysis to uncover the structural dynamics and communication pathways within hcis-PT. By solving the apo structure of hcis-PT, we reveal only a localized flexibility at the active site and the NgBR C-terminus. However, HDX-MS demonstrated widespread substrate-induced stabilization, particularly at the NgBR {beta}D-{beta}E loop, highlighting it as an allosteric hub. Functional mutagenesis scanning identified NgBRS249 as critical for enzymatic activity, independent of structural perturbations. Network analysis of MD simulations pinpointed this residue as a central node in inter-subunit communication, with perturbations disrupting downstream allosteric pathways, altering enzymatic activity. Our findings reveal a dynamic regulatory network centered at the inter-subunit interface, wherein specific NgBR residues modulate DHDDS activity through allosteric signaling. This work elucidates a conserved mechanism of subunit coordination in long-chain cis-prenyltransferases and suggests novel avenues for therapeutic targeting of hcis-PT-related disorders.

biochemistry↗