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Gerber, J. L.

Publications and source records attributed to Gerber, J. L..

2 recordsLinked to original sources

Second-order kinetics describe systemic clearance of therapeutic bacteriophages

Bacteriophage therapy is a promising alternative to antibiotics, yet its clinical translation is limited by the lack of a quantitative pharmacological framework to guide dosing and to predict efficacy. Here, we define the pharmacokinetics of therapeutic phages using a rat tissue cage model, which allows parallel sampling from blood and an artificial interstitial compartment. Across five virulent phages of three morphotypes targeting two pathogens, systemic clearance consistently followed second-order, concentration-dependent kinetics, representing a paradigmatic shift from frequently assumed first-order models. Phages rapidly distributed to peripheral compartments, where exposure was strongly influenced by administration route. Intravenous delivery maximized systemic titers but limited peripheral exposure, whereas local administration achieved high concentrations at target sites with undetectable systemic redistribution. Repeated dosing enhanced exposure but not peak titers. These findings define fundamental parameters to establish a quantitative framework for phage pharmacokinetics and support rational dose design.

microbiology↗

Structural and mechanistic insights into activation of the human RNA ligase RTCB by Archease

RNA ligases of the RTCB-type play an essential role in tRNA splicing, the unfolded protein response and RNA repair. RTCB is the catalytic subunit of the pentameric human tRNA ligase complex. RNA ligation by the tRNA-ligase complex requires GTP-dependent activation of RTCB. This active site guanylylation reaction relies on the activation factor Archease. The mechanistic interplay between both proteins has remained unknown. Here, we report a biochemical and structural analysis of the human RTCB-Archease complex in the pre- and post-activation state. Archease reaches into the active site of RTCB and promotes the formation of a covalent RTCB-GMP intermediate through coordination of GTP and metal ions. During the activation reaction, Archease prevents futile RNA substrate binding to RTCB. Moreover, monomer structures of Archease and RTCB reveal additional states within the RNA ligation mechanism. Taken together, we present structural snapshots along the reaction cycle of the tRNA ligase complex.

biochemistry↗