Biology subjects

Garcia, A.

Publications and source records attributed to Garcia, A..

At least 19 recordsLinked to original sources

bioRxiv2026

From Splicing to Survival: Understanding the Molecular Basis of Prognostic Differences in advanced Small Intestine Neuroendocrine Tumors

Small intestine neuroendocrine tumors (SI-NETs) represent a challenging neoplasm due to their high rate of metastasis and the limited availability of effective therapies. Recent evidence has unveiled altered splicing as an influential player in tumor progression, linked to patient prognosis, which provides a powerful source of novel biomarkers and therapeutic targets in cancer. Here, we conducted a comprehensive analysis regarding the possible connection of the spliceosomic landscape of metastatic SI-NETs with patient survival. Initial analyses revealed a distinctive pattern of splicing events between the two conditions, short (< 5 years, n = 17 patients), vs. long survival ([≥] 5 years, n = 26 patients), with strong discrimination capacity. Furthermore, numerous key splicing events were associated with relevant clinical parameters in SI-NETs. The observed impairments in spliceosomic parameters led us to interrogate the integrity of the splicing machinery. This revealed striking changes in the expression of a high proportion of core spliceosome components and splicing factors between short vs. longsurvival groups, suggesting a possible mechanistic link with the distinct profile of splicing events observed. Among them, CPSF2, a core component of the CPSF complex, stands out as its higher expression is associated with worse survival and vascular and perineural invasion. Interestingly, the shifts potentially generated by this factor supported a possible role in tumor plasticity oriented to higher tumor aggressiveness and treatment resistance. In sum, this study offers the first detailed snapshot of the status of the spliceosomic landscape in SI-NETs and its molecular linkage to patient survival, thus offering a new window towards identification of novel candidate biomarkers and/or therapeutic targets.

cancer biology↗

bioRxiv2026

NLRX1 is an essential, druggable regulator of mitochondrial permeability transition

The molecular composition of the mitochondrial permeability transition pore (mPTP) remains contested, and several efficacious mPTP inhibitors act through undefined, cyclophilin D (CypD)-independent targets. Using two structurally distinct chemotypes of optimised, brain-penetrant mPTP inhibitors as chemical probes, we applied affinity-based chemoproteomics to identify the mitochondrial NOD-like receptor NLRX1 as their shared target. Both chemotypes bind NLRX1, and binding potency across a compound series tracks mPTP-inhibitory activity. Using CRISPR-Cas9-edited human cells and Nlrx1-/- mouse tissues, we show that NLRX1 is required for normal calcium-induced mPTP opening: its loss raises the calcium threshold for pore opening and its overexpression lowers it, independently of CypD. NLRX1 associates with postulated mPTP components, including ATP synthase and the adenine nucleotide translocase, in a compound-sensitive manner, and sustains mitochondrial protein homeostasis over longer timescales. The lead compound, GSK900, is orally bioavailable, brain-penetrant, and active in an mPTP-sensitive neurological injury model. These findings, converging with recent genetic studies, establish NLRX1 as an essential, CypD-independent regulator of mitochondrial permeability transition and provide brain-penetrant chemical tools to interrogate this biology.

cell biology↗

bioRxiv2026

Deep learning-based identification and quantification of rare circulating hybrid cells in orthotopic pancreatic cancer models

SignificanceRare-cell identification in fluorescence microscopy remains challenging because targets are sparse and background varies between specimens. Combining specimen-specific fluorescence enrichment with image classification may enable efficient and more specific automated detection of rare cells. AimWe developed a two-stage framework to identify and quantify candidate rare circulating hybrid neoplastic cells (CHCs, ECAD+/CD45+) in peripheral blood mononuclear cell (PBMC) preparations from tumor-bearing and tumor-naive mice. ApproachPBMCs from 28 mice were imaged by multichannel fluorescence microscopy. Matched unstained samples established animal-specific ECAD and CD45 background distributions for candidate cell enrichment. Blinded multi-annotator consensus labels were used to train a convolutional neural network (CNN) from DAPI, ECAD, and CD45 image crops. Generalization was evaluated by leave-one-animal-out validation across 10 random initializations. Final classification used a 10-model ensemble, and rare-cell burden was compared between groups using negative-binomial regression with total segmented-cell count as an exposure. ResultsOf the 1,065,512 segmented cells, enrichment retained 10,176 candidates (0.96%), reducing the search space by >99%. Four of five evaluable tumor-bearing animals showed reproducible held-out discrimination, with median quantified area under the receiver operator characteristic curve (AUROCs) of 0.918-0.951; one animal was a reproducible outlier (median AUROC, 0.338). Ensemble deployment identified 157.94 positive-consensus cells per 50,000 segmented cells in tumor-bearing animals versus 49.55 in controls. The estimated rare-cell rate was 3.15-fold higher in tumor-bearing animals (95% CI, 0.91-10.99; two-sided p=0.071; prespecified one-sided p=0.036). ConclusionsSpecimen-specific fluorescence enrichment combined with supervised image classification reduced the cellular search space and enabled automated quantification of a rare CHC (ECAD+/CD45+) phenotypes. Cross-animal validation also identified specimen-specific generalization failure, highlighting the importance of biological-specimen-level validation.

cancer biology↗

bioRxiv2026

The novel HP1a interactor Clump/CG30403 safeguards transposon silencing and reproductive resilience in the Drosophila ovary

Heterochromatin and its core effectors from the Heterochromatin Protein 1 (HP1) family are essential for epigenetic silencing of repetitive regions and genome integrity from yeast to humans. However, how HP1s and associated factors regulate heterochromatin properties in vivo to sustain silencing across development, aging, and environmental factors, remains incompletely understood. Here, we identify Clump/CG30403 -- a previously uncharacterized MADF-BESS domain protein -- as a novel heterochromatin factor required for robust transposon silencing during Drosophila oogenesis and sustained fertility with age and temperature stress. Clump/CG30403 interacts with the main HP1-family silencing effector Su(var)205/HP1a through a noncanonical binding motif within its large intrinsically disordered region. Notably, in the absence of Clump/CG30403, HP1a mobility and silencing capacity are compromised despite largely unperturbed genomic distribution, showing that HP1a presence alone is insufficient for repression. We also show that Clump/CG30403 uniquely accumulates at its own promoter to self-repress and prevent ectopic aggregation, revealing a feedback mechanism to constrain protein dosage and phase behavior. Overall, we propose that Clump/CG30403 is a HP1 corepressor that acts as a tightly calibrated safeguard of the heterochromatin environment properties to ensure stable silencing, genome integrity, and persistent reproductive function.

molecular biology↗

bioRxiv2026

Transcription-induced coacervation accelerates and sensitizes cell-free biosensing

Cell-free biosensors leverage in vitro gene expression reactions to detect chemicals. While inexpensive, modular, and distributable, these platforms are constrained by slow readouts at ambient temperatures, precluding practical field operation. In cells, phase separation accelerates biochemical reactions; however, recapitulating these gains in vitro has remained challenging for complex biochemistries. Here, we report the first self-assembling coacervate system that accelerates in vitro transcription. Prepared by simple mixing, coacervation with spermine and polyacrylic acid occurs dynamically in response to NTP consumption and co-localizes DNA templates and RNA polymerase to accelerate transcription, mimicking intracellular phenomena. We exploit this discovery to accelerate the cell-free biosensing of six ligands, demonstrating that coacervation can preserve platform modularity, improve sensitivity, retain lyophilization compatibility, function in field matrices, and reduce ambient-temperature time-to-signal by hours. This work contributes to a growing understanding of phase separation in biology and advances the use of membrane-less organization for real-world applications.

synthetic biology↗

bioRxiv2026

Fentanyl-Induced Diaphragmatic Discoordination during Overdose

Synthetic opioids like fentanyl are a leading cause of overdose mortality. Although the hallmark of fentanyl overdose is ventilatory depression, fentanyl also induces tonic activation of skeletal musculature, including the diaphragm, which may advance progression of overdose towards death. While tonicity may further restrict diaphragmatic contractility, phase-specific dysregulation may also reflect a larger state of discoordination in respiratory control. Using urethane-anesthetized mice exposed to fentanyl, we test the hypothesis that fentanyl-induced diaphragm tonicity results from a loss of coordinated motor activity. Fentanyl produced two distinct phases: an initial phase of maximal ventilatory depression with preserved phasic activity, and a later phase characterized by unstable ventilation that partially rebounds, tonic diaphragmatic activation with loss of inspiratory phase dominance in EMG activity, and diminished bilateral diaphragmatic coordination. Carotid body denervation eliminated tonic activity and expiratory-phase EMG elevation, but it did not prevent hemi-diaphragm discoordination or ventilatory instability. Rhythmic brainstem slice recordings showed that bilateral preBotzinger complex burst-amplitude coupling was disrupted by -opioid receptor (MOR) agonism. Furthermore, disordered diaphragm activity was reversed by administration of the MOR antagonist, naloxone. Our findings reframe fentanyl overdose as a temporally evolving syndrome that involves distinct mechanisms to disrupt respiratory motor coordination. SIGNIFICANCE STATEMENTRespiratory depression is the hallmark of fentanyl overdose. We demonstrate that fentanyl actively reorganizes motor control of breathing, resulting in aberrant diaphragmatic tonicity and a loss of bilateral coordination. These phenomena emerge in temporal sequence and are driven by distinct central and peripheral contributions, suggesting fentanyl overdose is a complex multistage process and may require unique intervention strategies at different stages.

physiology↗

bioRxiv2026

Postprandial profiling of the duodenal microbiome reveals the impact of food structure and association with luminal metabolite and gut hormone responses

The human duodenum harbours a complex, dynamic microbial community that is challenging to study due to inaccessibility, particularly postprandially when nutrient-rich chyme and fluctuating metabolites create unique microbial niches. We used naso-duodenal intubation to longitudinally sample duodenal luminal contents following pea-based meals of differing food structure, alongside parallel blood collection. Shotgun metagenomic sequencing, comprehensive metabolomic profiling and gut hormone measurements were combined to explore microbe-metabolite-hormone interactions. Food structure significantly affected postprandial bacterial composition, with saccharolytic oral taxa increasing after meals with intact structure. Alpha diversity was influenced by structure type (P = 0.025), with whole pea seeds promoting greater diversity than pea flour. Network analysis revealed complex interactions between the duodenal microbiome, luminal metabolites and gut hormones, with most microbial associations linked to glucose-dependent insulinotropic polypeptide (GIP) rather than glucagon-like peptide-1 (GLP-1). Metabolic profiling showed meal-dependent changes in amino acid metabolism, including shifts in D/L amino acid ratios over time consistent with microbial metabolism. The duodenal microbiome showed close phylogenetic relationships with the oral microbiome, with composition influenced by food structuring and swallowing. These findings reveal dynamic microbe-metabolite interplay in the human duodenum during digestion and its relationship to gut hormone responses.

microbiology↗

bioRxiv2026

PD-1 blockade enhances T cell activation by reorchestrating CD28 and CTLA4 ligand interactions

The network of interactions comprising CD28, CTLA4 and PD-1 and their ligands CD80, CD86, and PD-L1 have profound implications for T cell activation. Despite their critical role, factors that determine their receptor occupancy when all three ligands are present remains incompletely understood. Using a supported lipid bilayer to replicate the antigen-presenting cell membrane facilitated a quantitative analysis of CD80, CD86, and PD-L1 interactions. Our observations reveal that PD-1 blockade operates through a previously unrecognized competitive mechanism beyond conventional checkpoint inhibition: liberated PD-L1 molecules redistribute to form CD80-PD-L1 heterodimers that strengthen CD28-CD80 interactions and outcompete CD86 for CD28 binding. This preferential binding enhances T cell activation through superior CD80 co-stimulation. Furthermore, the redistribution by PD-1 blockade reduces CD80 homodimer availability, limiting CTLA4 binding to CD80 and enhancing CD28 signaling. These findings provide vital insights into the competitive principles that allow B7-CD28 family receptors to regulate T cell activation through network-level effects.

immunology↗

bioRxiv2026

Noradrenergic neuromodulation produces a NMDAR-dependent network state of respiratory rhythmogenesis in the preBotzinger Complex

Norepinephrine (NE) is an important mediator of sympathetic activity that influences breathing. At the level of the inspiratory neural network, the preBotzinger complex (preBotC), NE modulation orchestrates changes in neuronal network dynamics that influence the stability of inspiratory rhythmogenesis. While this phenomenon has largely been attributed to NE-modulation of intrinsic excitability of inspiratory preBotC neurons, NE is also capable of modulating synaptic drive. Here, we resolve how NE affects synaptic properties and changes the activity dynamics of interconnected preBotC neurons in rhythmic brainstem slice preparations. Increased network burst amplitude and frequency coincided with enhanced inspiratory drive currents at the single neuron level. This increased drive was blocked by the NMDA receptor (NMDAR) antagonist, APV. Our in silico modeling indicated that synaptic calcium entry via NDMAR is key to maintaining network synchrony during this elevated state of excitability. This was consistent with our multi-electrode array studies revealing that NE-dependent NMDAR activity enhances and preserves synchrony during inspiratory network bursts. This synaptic mechanism may be a critical determinant for shaping inspiratory drive associated with changed neuromodulatory environments. Significance StatementThis study demonstrates a previously undescribed synaptic mechanism by which noradrenergic modulation recruits NMDAR activity and shifts inspiratory network dynamics leading to a stable network state where synchronization is preserved among inspiratory neurons. This may be a critical mechanism preventing ventilatory instability when sympathetic activity is enhanced.

neuroscience↗

bioRxiv2026

A modified Cas9 scaffold allows extension of the virus-induced gene editing technology to the large Potyvirus genus

Plant viruses are recognized as rapid and effective vectors to deliver CRISPR-Cas reaction components into plants, a strategy termed virus-induced gene editing (VIGE). However, VIGE is limited by the host range of the viral vectors. Development of new viral vectors to target a broad range of plant species will potentially enable the delivery of the editing components to new cultivars. Potyviruses (genus Potyvirus) comprises the largest group of plant RNA viruses. The main limitation of potyviral vectors to express a non-coding RNA consists of potential insertion of stop codons that interrupt the large open reading frame that encompass most potyviral genome. This is the case with the Streptococcus pyogenes Cas9 sgRNA scaffold, which contains stop codons in all three possible frames. In this work, we first built on a visual reporter system targeting the two homeologs of Nicotiana benthamiana Magnesium chelatase subunit I (CHLI). Second, we developed a tobacco etch virus (genus Potyvirus)-derived vector for VIGE by engineering a modified Cas9 scaffold, free of stop codons, to maintain the potyviral polyprotein reading frame while ensuring effective editing. This vector self-replicates and moves systemically, delivering sgRNAs efficiently throughout the plant. This allowed to obtain plants exhibiting a white phenotype with their four alleles edited through in vitro regeneration from infected leaves, and also to produce edited progeny. We further demonstrated the vector utility in tomato. Given the conserved biological properties within the genus Potyvirus, these findings must be broadly applicable to other potyviruses, expanding the reach of the VIGE technology.

plant biology↗

bioRxiv2025

The N-terminal region of malaria vaccine candidate Plasmodium falciparum asparagine-rich merozoite antigen is immunodominant and targeted by polyreactive antibodies

The development of malaria blood-stage vaccines has been hampered by sequence variation in many Plasmodium falciparum proteins involved in erythrocyte invasion. In the past few years, asparagine-rich merozoite antigen (PfARMA) has emerged as a potential vaccine candidate due to its low amino acid sequence diversity and the association between anti-PfARMA antibody levels and protection to malaria. Here, we used samples from P. falciparum-exposed individuals to study naturally acquired B cell and antibody responses to PfARMA. B cell responses to PfARMA were dominated by IgM+ B cells that recognized the N-terminal intrinsically disordered region 1 (IDR1) of PfARMA. A human monoclonal antibody (hmAb) to IDR1 was non-neutralizing, while a second hmAb binding to the folded domain showed weak neutralizing activity. Both PfARMA-specific plasma IgM and IgG responses predominately targeted IDR1 and their levels increased with P. falciparum exposure. However, in contrast to previous reports, these antibody responses did not correlate with protection in age and exposure-matched children. Interestingly, approximately 30% of unexposed individuals had IgG that also targeted IDR1 and was polyreactive, binding to regions with high asparagine content. Finally, we determined that PfARMA is located in or near PfEBA-175+ micronemes. These data suggest that while IgG to the folded domain of PfARMA may inhibit parasite growth, antibody responses to PfARMA are primarily directed to IDR1 and may not directly contribute to protection against malaria.

immunology↗

bioRxiv2025

A microgel bone marrow model of mesenchymal stem cell paracrine signaling supporting hematopoietic stem cell retention

Hematopoietic stem cells (HSCs) housed within the bone marrow give rise to the full complement of blood and immune cells. Methods to expand HSCs ex vivo have traditionally relied on two-dimensional or liquid culture, but hydrogel approaches have been hypothesized to provide three-dimensional bone marrow-associated biophysical and biomolecular signals that may improve HSC expansion and maintenance ex vivo. Here, we describe a granular biomaterial approach to create a multicellular model of the bone marrow. By seeding HSCs amongst mesenchymal stromal cell (MSC)-laden hydrogel microspheres (microgels), we establish paracrine-mediated interactions between HSCs and hydrogel encapsulated MSCs. We provide support for the importance of microgel encapsulation for the emergence of niche-favorable MSC transcriptional profiles. We identify a common cell culture media that accommodates MSC activity while avoiding the use of serum that typically induces differentiation of HSCs. We observe an MSC-density-dependent increase in maintenance of long-term repopulating HSCs in granular co-culture, and we identify significant depletion of long-term repopulating HSCs when both HSCs and MSCs are interstitially seeded in the granular matrix. Together, these findings establish a granular hydrogel co-culture model to examine the influence of MSC-HSC interactions on maintenance and expansion of HSCs in a defined three-dimensional engineered tissue.

bioengineering↗

bioRxiv2025

NDNF+ interneurons have a privileged role in regulating cortical excitability

Cortical processing depends critically on the precise modulation of excitatory activity by a diverse population of GABAergic interneurons. Among these, neuron-derived neurotrophic factor-expressing (NDNF+) interneurons have been proposed to be "master regulators" of cortical microcircuits. While their role in coordinating physiological cortical activity is beginning to be understood, their contribution to restraining hyperexcitability during epileptiform activity remains unexplored. To address this, we employed calcium imaging, optogenetics, and chemogenetics in an NDNF-Cre mouse line to investigate how NDNF+ interneurons influence cortical hyperactivity and spontaneous seizures. Our results demonstrate that NDNF+ interneurons are actively recruited during interictal spikes and focal seizures, although more slowly than parvalbumin-positive interneurons. Optogenetic hyperpolarization of NDNF+ interneurons exacerbates epileptic discharges, whereas their depolarization suppresses focal seizures, even when the optogenetic stimulus is delayed by several seconds from seizure onset. This effect is largely mediated by GABAB receptor signalling. Additionally, chemogenetic depolarization of NDNF+ interneurons has robust antiepileptic effects both ex vivo and in vivo. Collectively, these findings establish NDNF+ neurons as key regulators of cortical excitability and identify them as promising cellular targets for the development of anti-epileptic therapies.

neuroscience↗

bioRxiv2025

Early Sleep-Dependent Sensory Gating in the Olfactory System

Disconnection from the external world is a defining feature of sleep. Although most models attribute sensory gating to thalamocortical mechanisms, the olfactory system--bypassing the thalamus--offers a unique window into earlier stages of sensory disconnection. Here, we combine chronic and acute recordings in rodents to test whether nasal sensory inputs are internalized during sleep. We show that respiration-locked potentials and gamma activity in the olfactory bulb are strongly modulated by brain state: they diminish during sleep and reappear during wakefulness and cortical activation. This gating occurs independently of respiratory dynamics and arises near the first synapse of the olfactory pathway. Finally, we find that neocortical slow-wave activity correlates with reduced connectiveness, with coupling progressively vanishing as sleep deepens. These findings reveal a sleep-dependent sensory gating mechanism at early stages of a non-thalamic pathway, providing new insights into the neural substrates of sensory disconnection during sleep.

neuroscience↗

bioRxiv2025

Target validation uncouples TSPO from 19-Atriol-mediated inhibition of steroidogenesis and reveals true enzymatic targets

The mitochondrial translocator protein (TSPO) was once proposed to mediate mitochondrial cholesterol import for steroid hormone biosynthesis, but genetic deletion studies in multiple models have refuted this role. Nevertheless, the idea that pharmacological ligands of TSPO can modulate steroid output continues to be invoked. One such compound, 19-Atriol (androst-5-ene-3{beta},17{beta},19-triol), was reported to inhibit progesterone synthesis via TSPO binding in MA-10 Leydig cells. To evaluate this proposed mechanism, we used CRISPR/Cas9-generated Tspo-deleted MA-10 cells to study 19-Atriol activity. We found that 19-Atriol inhibited Bt2-cAMP-stimulated steroid output independent of TSPO expression; it acted as a competitive inhibitor of 3{beta}-hydroxysteroid dehydrogenase (3{beta}-HSD), blocking the conversion of pregnenolone to progesterone. Mass spectrometry revealed that 19-Atriol is also a substrate for 3{beta}-HSD, yielding 19-hydroxytestosterone (19-OHT), which itself inhibits 3{beta}-HSD activity. In addition to this effect, both 19-Atriol and 19-OHT decreased cholesterol-to-pregnenolone conversion during stimulation. Partial inhibition of 22R-hydroxycholesterol metabolism by CYP11A1 was observed with 19-Atriol, but not 19-OHT, suggesting direct or indirect effects on this upstream step, potentially involving the steroidogenic acute regulatory protein (STAR). These findings decisively exclude TSPO as a functional mediator of 19-Atriol activity and instead identify direct enzymatic targets within the de novo steroidogenic pathway. By resolving a key mechanistic misattribution, this study underscores the importance of rigorous target validation, particularly for compounds previously assumed to act via TSPO.

pharmacology and toxicology↗

bioRxiv2025

Revisiting daily growth and survival insights of Southern bluefin tuna (Thunnus maccoyii) larvae in the eastern Indian Ocean

This study analyzed the growth patterns and survival of Southern bluefin tuna (SBT, Thunnus maccoyii) larvae collected during January-February 2022 in their only known spawning area in the eastern Indian Ocean (IO). Otolith microstructure was examined to characterize both population-level and intra-population growth (OPT-optimal and DEF-deficient group), with special emphasis on the flexion process, as well as to provide insights into larval survival. SBT larvae began flexion at sizes and ages comparable to those reported in other bluefin tuna species. At the intra-population level, larvae reached flexion at the same age; however, optimal (OPT) larvae reached this stage in better physical condition, with greater length, weight, and body depth, likely increasing their chances of survival at later stages. The observed larval growth rates (0.38 mm{middle dot}d-{superscript 1}) exceeded those from a historical study in 1987 (0.33 mm{middle dot}d-{superscript 1}), likely due to a [~]2 {degrees}C increase in sea surface temperature and shifts in prey availability. Larval survival appears to depend on a selective process based on growth, in which only a small proportion of individuals (<2%) exhibited width increment in otoliths similar to those of surviving larvae, allowing for faster development and earlier access to larger prey. These findings highlight the need for expanded research on the early life stages of SBT, particularly in the context of ongoing ocean warming and climate change.

ecology↗

bioRxiv2025

Temporal dynamics of CNS cholesterol esters correlate with demyelination and remyelination

Elevated cholesterol ester levels have been observed in the CNS of patients with neurological diseases, yet the source of cholesterol ester accumulation and whether it is directly linked to demyelination remains undefined. This study investigates the temporal dynamics of cholesterol esters using the Plp1-iCKO-Myrf mouse model, which features distinct phases of demyelination and remyelination. Our findings reveal that cholesterol ester levels increased with demyelination in both the brain and the spinal cord. In the brain, cholesterol esters declined to normal levels during remyelination, whereas cholesterol esters remained elevated in the spinal cord, which had limited remyelination. Expression of both acetyl-CoA-acyltransferase 1 (ACAT1) and lecithin-cholesterol acyltransferase (LCAT) were elevated during demyelination, suggesting the potential involvement of both proteins in the formation of cholesterol esters. Co-localization studies revealed that ACAT1 is predominantly expressed by microglia and LCAT is predominantly expressed by astrocytes during demyelination highlighting the active roles of glia cells in cholesterol ester metabolism. In addition, we showed that administering the remyelinating drug, Sob-AM2, effectively reduced the level of cholesterol ester accumulation in the brain during demyelination underscoring the potential that manipulating cholesterol ester regulatory pathways may offer for restoring cholesterol homeostasis and promoting remyelination in demyelinating diseases.

neuroscience↗

bioRxiv2025

Detecting Phenotypic Variability in Lupinus angustifolius Through Ecogeographic Land Characterization

Germplasm banks hold substantial potential across numerous branches of life sciences. However, this potential remains underutilized, partly due to the limited and incomplete characterization of the accessions. To address this issue, we propose the use of Ecogeographical Land Characterization (ELC) maps as a tool for classifying accessions into distinct ecological regions, thereby simplifying the characterization process. To test this approach, we collected Lupinus angustifolius seeds from multiple locations across the Iberian Peninsula, guided by a previously developed ELC map. Our results suggest that ELC maps effectively condense the Iberian landscape while capturing a moderate proportion of the species phenotypic variation. Overall, this approach offers a promising avenue to optimize germplasm conservation strategies while balancing resource limitations.

ecology↗