bioRxiv Science⌕ Search

Biology subjects

Fruehbauer, B.

Publications and source records attributed to Fruehbauer, B..

2 recordsLinked to original sources

Nuclear mechanostability emerges from satellite DNA condensation into chromocenters

As the largest organelle, the nucleus endures significant mechanical stresses over the cellular lifespan, and mechanostability, i.e. the ability to resist deformation, is critical for genome integrity and function. Here, we reveal that nuclear mechanostability is an emergent property arising from the clustering of satellite DNA repeats into nuclear condensates known as chromocenters. Targeted chromocenter disruption in Drosophila testes subjected to natural and artificial mechanical stress compromises nuclear mechanostability, leading to deformed nuclei, DNA damage, and chromosome breaks. Conversely, enhancing chromocenter coalescence through genetic means improves mechanostability. Molecular dynamics simulations suggest that chromocenters enable physically linked chromosomes to respond collectively, rather than individually, to mechanical challenge, and dissipate external forces over a larger nuclear surface. We propose that the satellite DNA-dependent mechanostability framework described here likely extends to other cells and tissues facing mechanical stress, and offers an explanation for the evolutionary success of these non-coding repeats across eukaryotes.

cell biology↗

Dynamic, yet well-defined organization of the FUS RGG3 dense phase

Intrinsically disordered protein regions (IDRs) play a key role in the formation of biomolecular condensates, a ubiquitous mode of cellular compartmentalization, but the underlying microscopic details remain unclear. Here, microsecond-level molecular dynamics simulations and fractal formalism are employed to study at atomistic resolution a model condensate composed of 24 copies of a C-terminal 73-residue arginine- and glycine-rich IDR (RGG3) of fused in sarcoma (FUS) protein. Specifically, RGG3 displays a highly dynamic behavior in the dense phase with only a small configurational entropy loss and a minor slowdown in diffusion as compared to the dilute phase. Despite rapid mixing, short contact residence times and structurally heterogenous binding interfaces in the dense phase, RGG3 exhibits a distinct dynamic binding mode, with statistically defined interaction motifs and a robust multi-scale topology of self-associated protein clusters. The results demonstrate how a well-defined organization of the disordered protein dense phase across scales emerges from highly heterogenous, transient interactions.

biophysics↗