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Freischmidt, A.

Publications and source records attributed to Freischmidt, A..

2 recordsLinked to original sources

Loss of FXR1 and FXR2 promotes accumulation of TDP-43 in aging-related stress granules

Cytoplasmic mislocalization and aggregation of the RNA-binding protein TDP-43 in vulnerable neurons may accompany the primary neuropathology of various neurodegenerative diseases, or represent the hallmark of others, such as amyotrophic lateral sclerosis. Aging is the major risk factor for neurodegeneration, and sufficient to induce accumulation of TDP-43 in chronic cytoplasmic stress granules possibly further maturing to irreversible aggregates. Reduced expression of Fragile X protein (FXP) family members (FMR1, FXR1 and FXR2) in vulnerable neurons is associated with neurodegeneration, and loss of each individual FXP induces overlapping and unique aging-related phenotypes in HAP1 and SH-SY5Y cell models. Therefore, we analyzed consequences of FXP loss on TDP-43 cytoplasmic mislocalization and stress granule formation in fibroblast-like HAP1 FXP knockout cells. FXP loss induced nuclear pore pathology, and passive egress of proteins and RNA was evident upon loss of FXR1 or FXR2. Cytoplasmic mislocalization of TDP-43 was restricted to FXR1 knockout cells upon impairment of nuclear import, and cytoplasmic TDP-43 induced spontaneous stress granules exclusively in FXR2 knockout cells. In contrast, loss of FMR1 had no effect on nucleocytoplasmic exchange or TDP-43. Hence, reduced expression of FXR1 and FXR2 in aging and neurodegeneration may contribute to TDP-43 pathology.

cell biology↗

Somatic mutations in ALS genes in the motor cortex of sporadic ALS patients

Amyotrophic lateral sclerosis (ALS) is characterized by the progressive degeneration of cortical and spinal motor neurons. Mendelian germline mutations often cause familial ALS (fALS) but only approximately ten percent of sporadic ALS cases (sALS). We leveraged DNA and single cell RNA-sequencing data from autopsy tissue to explore the presence of somatic mosaic variants in sALS cases. Deep targeted panel sequencing of known ALS disease genes in motor cortex tissue revealed an enrichment of low allele frequency variants in sALS, but not in fALS with an identified monogenic cause. In silico analysis predicted increased pathogenicity of mosaic mutations in various known ALS mutational hot spots. In particular, we identified the somatic FUS variant p.E516X, located in an established hot spot for germline ALS mutations, which leads to nucleo-cytoplasmic mislocalization and aggregation typical for ALS FUS pathology. Additionally, we performed somatic variant calling on single cell RNA-sequencing data from sALS tissue and revealed a specific accumulation of somatic variants in excitatory neurons, reinforcing a neuron-autonomous disease initiation. Collectively, this study indicates that somatic mutations within the motor cortex, especially in excitatory neurons, may contribute to sALS development.

genetics↗