Biology subjects

Fournet, F.

Publications and source records attributed to Fournet, F..

11 recordsLinked to original sources

bioRxiv2026

How urban vegetation influences dynamics of Aedes albopictus egg density: three years of surveillance in Montpellier (France)

Nature-Based Solutions are increasingly promoted to address current urban challenges. While their potential effects on vector-borne disease risks have been documented, data on Aedes albopictus, a known arbovirus vector, remain limited in France. A previous study showed that urban vegetation moderately increases the abundance of adult mosquitoes of this species, but the monitoring period lasted only six months. Using ovitraps, we monitored Ae. albopictus egg density dynamics over multiple years (2022 to 2024) and analysed its environmental predictors in various urban environments. We included lagged meteorological variables, land cover metrics, and the cumulated egg densities recorded in the previous weeks as environmental predictors. Both parametric (GLMM) and non-parametric (Random Forest) models were fitted to weekly egg counts per trap. Our findings highlight that (i) egg density dynamics were related to how vegetation classes structured the landscape, (ii) growing degree days and cumulated number of eggs recorded in specific lagged time windows were the main contributors to egg density, and (iii) the non-parametric and parametric models performed similarly in terms of prediction accuracy.

ecology↗

bioRxiv2026

Aedes albopictus and dengue transmission risk in France over the 21st century

Climate change is dramatically affecting species distribution and phenology worldwide. Its impact on arthropod vectors, such as the Aedes albopictus mosquito, has important consequences for biting nuisance and arbovirus transmission risk. Here, we assess the impact of climate change on the presence and abundance of Ae. albopictus, as well as the risk of dengue transmission over France during the 21st century. We use a mechanistic model that we adjusted against records of recent autochthonous cases of dengue in France. We simulate climatic suitability indicators, such as the adult abundance during the activity period, epidemic risk and secondary cases of dengue under different climatic and demographic scenarios at different periods up to 2085. Future simulations are based on a high-pressure scenario (high greenhouse gas emissions, high demographic growth) and a median-pressure scenario (median greenhouse gas emissions, demographic stagnation). To account for climate model uncertainty, we repeat the simulations for three different regional climate models. By 2085, in the high-pressure scenario, most of France (89-96%) will be climatically suitable for the establishment of Ae. albopictus, with the exception of mountain ranges. Similarly, autochthonous transmission of dengue will be theoretically possible in all colonized areas except over northern lowlands (71-95%). In the median pressure scenario, both climatic suitability for establishment (49-89%) and autochthonous dengue transmission risk (31-82%) exhibit large variation. Low population density areas show moderate suitability for vector establishment but exhibit the highest potential for dengue transmission. Overwintering mechanisms, such as egg diapause, indispensable for survival in temperate climates, may not be necessary along the Mediterranean and Basque coasts, allowing activity of the vector all year-round in the future.

ecology↗

bioRxiv2026

Vegetated urban spaces increase Aedes albopictus survival and the risk of Dengue and Chikungunya Transmission: a field and modelling study in Montpellier, France

IntroductionBy 2025, Aedes albopictus had spread across France, leading to a rise in indigenous arboviral cases since 2021. While urban greening is promoted for its health and climate benefits, its potential adverse effects on arboviral risk remain understudied. Urban green spaces may enhance mosquito habitats and human-vector contact. MethodsThis study investigates the variation in Aedes albopictus longevity across months and urban environments in Montpellier, a green Mediterranean city, and its impact on the theoretical basic reproductive number (R0) for Chikungunya, Dengue, and Zika viruses. From May to October 2023, female mosquitoes were sampled monthly using CO2 traps in three urban environments: urban parks, impervious areas, and residential areas composed of houses with gardens. Daily mosquito survival was estimated from parity rate measurements, and the associated environmental determinants were analysed. Modelled predictions, crude field estimates of vector density and parity rates, and microclimatic data were used to parameterize and feed R0 models. For each environment (or sampling area), 1000 monthly R0 simulations were run, followed by sensitivity analyses. Results/DiscussionThe highest mean daily survival (0.917) was observed in residential areas, compared to parks (0.887) and impervious areas (0.873). A daily average exposure of 10% of possible bites induces potential transmission risks for CHIKV and DENV. R0 varied by environment and month, with higher values in residential areas and with greater variability in impervious areas. Parity rate emerged as the main driver of R0 variability. These results highlight the value of fine-scale field data for arboviral risk assessment.

ecology↗

bioRxiv2025

Green cities and the risk for vector-borne disease transmission for humans and animals: a scoping review

BackgroundGreening cities is a nature-based strategy for sustainable urban development that integrates natural elements like plants or water bodies, to mitigate climate change impacts and enhance human well-being. However, urban green infrastructures (UGIs) can influence the distribution of disease vectors, potentially affecting vector-borne diseases (VBDs). UGIs may provide new suitable environments for urban vectors, while also creating opportunities to mitigate VBD risks through predation, competition, and dilution effects. This article examined the relationships between UGIs, vectors, and associated pathogens, impacting both human and animal health, highlighting knowledge gaps and identifying research priorities to support VBD risk mitigation measures and to guide smart urban planning and design. MethodsA systematic literature search was conducted following PRISMA guidelines in three databases (Pubmed, Scopus, Web of Science). Selected articles involved (i) any aspect of a urban vector system, (ii) in UGIs, and (iii) statistical analysis of the effects of UGIs on VBD risk. Methods employed to characterize UGIs and VBDs were described and the identified impacts were summarized by vector group. ResultsAmong the 98 articles reviewed, most addressed mosquito-pathogen systems (66), tick-pathogen systems (29), and few other vector-borne pathogen systems (3), with studies often confined to a single city or several cities within the same country and focused on one vector group. Urban vegetation generally appeared to heighten the risk of tick-borne diseases. In contrast, the influence of UGIs on the risk of mosquito-borne diseases varied depending on the vector system and on the environmental and climatic context. The diversity of indicators used to assess UGIs and VBD risks may affect the observed impact on VBD risk. ConclusionGiven the increasing popularity of urban greening, it is crucial to investigate its potential implications for public health, and thereby urban planning decisions. However, the lack of standardized protocols complicates the accurate assessment of the effects of UGIs on the risk for VBD emergence and transmission and consequently, on potential mitigation measures.

ecology↗

bioRxiv2025

Investigating the role of urban vegetation alongside other environmental variables in shaping Aedes albopictus presence and abundance in Montpellier, France

Urban greening helps address urbanization challenges, but it may also favor mosquito species, vectors of pathogens causing human diseases. This study examines the relationship between urban vegetation and the presence and abundance of Aedes albopictus in Montpellier, the second greenest city of France, while accounting for meteorology, microclimate, air quality, human socio-demography, and landscape. From May to October 2023, adult mosquitoes were collected monthly in urban parks, residential areas, and the highly impervious city center using BG-Pro traps with odor and CO2 attractants. Microclimate data (air temperature and relative humidity) were recorded on-site at each trap location using Hygrobutton data-loggers. Vegetation, land cover, meteorological, air quality, and human demographic data were gathered from open-access databases. Ae. albopictus presence and abundance were analysed according to environmental variables taken at different time lags and spatial distances using a two-stage modeling approach: bivariate analyses using generalized linear mixed models were conducted to select variables for inclusion in a multivariate random forest model, aiming to identify the factors that best explain Ae. albopictus presence and abundance. While urban vegetation had a limited effect on Ae. albopictus presence, the average patch size, and the percentage of area covered by low vegetation were among the most important predictors of abundance. The main predictors for presence were minimum hourly temperature (24h-48h before sampling), minimum atmospheric pressure during sampling, and the weekly cumulated rainfall recorded six weeks before sampling. The most important predictors of abundance were the average patch size of low vegetation, the maximum hourly temperatures during sampling, and the length of roads. To our knowledge, this is the first study examining urban vegetations influence on Ae. albopictus in France, offering insights for urban planning and suggesting further research on vegetations role in mosquito-borne disease transmission, particularly in the context of increasing dengue incidence in Europe.

ecology↗

bioRxiv2025

Aedes albopictus is rapidly invading its climatic niche in France: wider implications for biting nuisance and arbovirus control in Western Europe

The Asian tiger mosquito, Aedes albopictus, is a competent vector of arboviruses, such as dengue. After its introduction into southern Europe, this invasive species has been rapidly spreading as well as causing autochthonous cases of arboviral diseases. Both Ae. albopictus presence and potential to transmit arboviruses are facilitated at warm temperatures, hence global warming is expected to affect their presence in temperate regions. We use a climate- and environmental-driven mechanistic modelling framework to investigate the impact of recent climate change on Ae. albopictus range expansion and its potential to transmit dengue in Western Europe. We simulate climatic suitability, adult density and dengue transmission risk which we compare with a large ensemble of entomological and epidemiological observations over the past 20 years. Most importantly, we analyze a novel spatiotemporal dataset of colonized municipalities in metropolitan France to estimate the spread rate of Ae. albopictus and compare it with model predictions. Lastly, we analyze the sensitivity of entomological and epidemiological risk to changes in temperature, rainfall and human density. Distribution of simulated mosquito populations and dengue transmission risk satisfactorily match entomological and dengue observations for Western Europe (AUC = 0.90 and 0.75 respectively). While lowlands in southern Europe were already climatically suitable for hosting Ae. albopictus around 2010, Western France, together with large populated cities, such as London, Zagreb and Vienna, have become suitable recently. Importantly, the accelerating colonization of Ae. albopictus in France may be approaching the limit of its theoretical climatic niche; future expansion will depend on the climate-driven enlargement of suitable areas. Area at risk of dengue transmission has recently expanded from the Mediterranean coasts over northern Spain and Western France. The sensitivity analysis suggests that climate change may expose medium-sized cities to the highest epidemiological risk; this finding is consistent with recently reported dengue outbreaks in Europe.

ecology↗

bioRxiv2022

Assessment of Culicidae collection methods for xenomonitoring lymphatic filariasis in malaria co-infection context in Burkina Faso

BackgroundEntomological surveillance of lymphatic filariasis (LF) and malaria infections play an important role in the decision-making of national programs, to control or eliminate these both diseases. In order to corroborate infections in the human population, sampling large numbers of mosquitoes is necessary. To overcome this challenge, this study was design to assess the efficiency of four mosquito collection methods for monitoring LF and malaria infections in mosquito population. Methodology/Principle FindingsMosquito collections were performed between August and September 2018 in four villages (Koulpissy, Seiga, and Peribgan, Saptan), distributed in East and South-West health regions of Burkina Faso. Different collection methods were used: Human Landing Catches (HLC) executed indoor and outdoor, Window Exit-Trap, Double Net Trap (DNT) and Pyrethrum Spray Catches (PSC). Molecular analyses were performed to identify Anopheles gambiae s.l. sibling species and to detect Wuchereria bancrofti and Plasmodium falciparum infection in mosquitoes. A total of 3,322 mosquitoes were collected among this, Anopheles gambiaes.l. was the vector caught in largest proportion (63.82%). An. gambiae s.l. sibling species molecular characterization showed that Anopheles gambiae was the dominant specie in all health regions. The Human Landing Catches (indoor and outdoor) collected the highest proportion of mosquitoes (between 61.5%and 82.79%). For sampling vectors infected to W. bancrofti and P. falciparum, PSC, HLC and Window Exit-Trap were been find as the most effective collection methods. Conclusions/SignificanceThis study revealed that HLC indoor and outdoor remained the most effective collection methods. Likewise, the results showed the probability to use Window Exit-Trap and PSC collection methods to sample Anopheles infected and can be useful for xenomonitoring for both LF and malaria. Author summaryIn Burkina Faso the monitoring and evaluation scheme to assess the impact of LF and malaria interventions is only focusing on parasitological tests. While nowadays, the most simple and direct measure of vector borne diseases is xenomonitoring. Thus, in order to confirm both diseases infection rate in the human population, sampling large numbers of mosquitoes is necessary. This study was undertaken in this context to assess the efficiency of four mosquito collection methods for xenomonitoring LF and malaria. Mosquito collections were performed between August and September 2018 in four villages, distributed in East and South-West health regions of Burkina Faso. Human Landing Catches (HLC), Window Exit-Trap, Double Net Trap (DNT) and Pyrethrum Spray Catches (PSC) were evaluated. The results showed that HLC remained the most effective collection method by collecting the highest number of Anopheles (2,388; 71.88% of total). Across the study, mosquito infection rate for Wuchereria bancrofti and Plasmodium falciparum were 0.004 and 0.13 respectively. To collect vectors infected it was found that Window Exit-Trap and PSC were efficiencies. In conclusion, HLC has shown to be appropriate for collect large number of mosquitoes. Likewise, Window Exit-Trap and PSC can be useful for xenomonitoring for both LF and malaria.

pathology↗

bioRxiv2021

INTEGUMENT-SPECIFIC TRANSCRIPTIONAL REGULATION IN THE MID- STAGE OF FLAX SEED DEVELOPMENT INFLUENCES THE RELEASE OF MUCILAGE AND THE SEED OIL CONTENT

Flax (Linum usitatissimum L.) seed oil, which accumulates in the embryo, and mucilage, which is synthesized in the seed coat, are of great economic importance for food, pharmaceutical as well as chemical industries. Theories on the link between oil and mucilage production in seeds consist in the spatio-temporal competition of both compounds for photosynthates during the very early stages of seed development. In this study, we demonstrate a positive relationship between seed oil production and seed coat mucilage extrusion in the agronomic model, flax. Three recombinant inbred lines were selected for low, medium and high mucilage and seed oil contents. Metabolite and transcript profiling (1H NMR and DNA oligo-microarrays) was performed on the seeds during seed development. These analyses showed main changes in the seed coat transcriptome during the mid-phase of seed development (25 Days Post-Anthesis), once the mucilage biosynthesis and modification processes are thought to be finished. These transcriptome changes comprised genes that are putatively involved in mucilage chemical modification and oil synthesis, as well as gibberellic acid (GA) metabolism. The results of these integrative biology approach, suggest that transcriptional regulations of seed oil and fatty acid (FA) metabolism could occur in the seed coat during the mid-stage of seed development, once the seed coat carbon supplies have been used for mucilage biosynthesis and mechanochemical properties of the mucilage secretory cells.

plant biology↗

bioRxiv2021

The pH-dependent processivity of Arabidopsis AtPME2 can control cell wall mechanical properties

Pectin methylesterases (PMEs) modify homogalacturonans (HG) chemistry and play a key role in regulating primary cell wall mechanical properties. How PME activity can fine-tune pectin structure in the growing plant has remained elusive. Here we report on the Arabidopsis AtPME2, which we found to be highly expressed during lateral root emergence and dark-grown hypocotyl elongation. We produced the mature active enzyme using heterologous expression in Pichia pastoris and characterized it through the use of a generic plant PME antiserum suitable for detecting recombinant and native enzyme independent of species source. At neutral pH AtPME2 is preferentially active on pectins with a degree of 55-70% methylesterification and can be inhibited by PME inhibitor protein (PMEI). We show that the mode of action for AtPME2 can switch from full processivity (at pH 8), creating large blocks of unmethylated galacturonic acid, to low processivity (at pH 5) and relate these observations to the differences in electrostatic potential of the protein at acidic and alkaline pH. To assess the role of AtPME2 in development, we characterized two knock-out lines. We show that in the context of acidified apoplast, low-processive demethylesterification by AtPME2 can loosen the cell wall, with consequent increase in cell elongation and etiolated hypocotyl length. Our study brings insights into how the pH-dependent regulation by PME activity could affect pectin structure and associated cell wall mechanical properties in expansion. One sentence summaryThe processivity of AtPME2, a pectin methylesterase that fine-tunes cell wall pectins is modulated by pH in vitro and impacts the mechanical properties of the wall, affecting development in planta.

plant biology↗

bioRxiv2019

Anopheles bionomic, insecticide resistance and malaria transmission in southwest Burkina Faso: a pre-intervention study

BackgroundThe present study presents results of entomological surveys conducted to address the malaria vectors bionomic, insecticide resistance and transmission prior to the implementation of new strategies complement long-lasting insecticidal nets (LLINs) in the framework of a randomized control trial in southwest Burkina Faso. MethodsWe conducted entomological surveys in 27 villages during the dry cold season (January 2017), dry hot season (March 2017) and rainy season (June 2017). We carried out hourly catches (from 17:00 to 09:00) inside and outside 4 houses in each village using the Human Landing Catch technique. Mosquitoes were identified using morphological taxonomic keys. Specimens belonging to the Anopheles gambiae complex and Funestus Group were identified using molecular techniques as well as detection of Plasmodium falciparum infection and insecticide resistance target-site mutations. ResultsEight Anopheles species were detected in the area. Anopheles funestus s.s was the main vector during the dry cold season. It was replaced by Anopheles coluzzii during the dry hot season whereas An. coluzzii and An. gambiae s.s. were the dominant species during the rainy season. Species composition of the Anopheles population varied significantly among surveys. All researched target site mutation of insecticide resistance (kdr-w, kdr-e and ace-1) were detected in all members of the An. gambiae complex of the area but at different frequencies. We observed early and late biting phenotypes in the main malaria vector species. Entomological inoculation rates were 0.087, 0.089 and 0.375 infected bites per human per night during dry cold season, dry hot season and rainy season, respectively. ConclusionThe intensity of malaria transmission was high despite the universal coverage with LLINs. We detected early and late biting phenotypes in the main malaria vector species as well as physiological insecticide resistance mechanisms. These vectors might mediate residual transmission. These data highlight the need to develop complementary tools in addition to LLINs in order to better control resistant malaria vectors and to monitor insecticide resistance.

epidemiology↗

bioRxiv2019

Anopheles bionomics, insecticide resistance mechanisms and malaria transmission in the Korhogo area, northern Cote d Ivoire: a pre-intervention study

BackgroundA better understanding of malaria transmission at a local scale is essential for developing and implementing effective control strategies. In the frame of a randomized control trial, we aimed to provide an updated description of malaria transmission in the Korhogo area, northern Cote dIvoire, and to get baseline data for the trial.\n\nMethodsWe performed Human Landing Collections in 26 villages in the Korhogo area during the rainy season (September-October 2016, April-May 2017) and the dry season (November-December 2016, February-March 2017). We used Polymerase chain reaction techniques to ascertain the species of the An. gambiae complex, Plasmodium sp sporozoite infection and insecticide resistance mechanisms in a subset of Anopheles vectors.\n\nResultsAnopheles gambiae s.l. was the predominant malaria vector in the Korhogo area. Overall, more vectors were collected outdoors than indoors (P < 0.001). Of the 774 An. gambiae s.l. tested in the laboratory, 89.65% were An. gambiae s.s. and 10.35% were An. coluzzii. The frequencies of the kdr allele were very high in An. gambiae s.s. but the ace-1 allele was found at moderate frequencies. An unprotected individual living in the Korhogo area received an average of 9.04, 0.63, 0.06 and 0.12 infected bites per night in September-October, November-December, February-March, and April-May, respectively.\n\nConclusionsThe intensity of malaria transmission is extremely high in the Korhogo area, especially during the rainy season. Malaria control in highly endemic areas such as Korhogo needs to be strengthened with complementary tools in order to reduce the burden of the disease.

zoology↗