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Farahani, F. V.

Publications and source records attributed to Farahani, F. V..

2 recordsLinked to original sources

The State of Motion: Demographic and representational consequences of motion-based exclusion in fMRI

Large-scale neuroimaging datasets are increasingly used to map relationships between brain structure, function, and behavior across the human lifespan. Routinely, analyses exclude participants who moved too much during imaging. While this decision is framed as quality control, it is increasingly recognized that head motion is not randomly distributed across individuals within a study, and so motion-based exclusion may preferentially remove people with particular characteristics relevant to the scientific goals of the study. Here we survey head motion and how it relates to participant characteristics across six large, publicly available datasets spanning nearly the entire human lifespan, namely the Human Connectome Project (HCP) Young Adult, HCP in Development, HCP in Aging, Adolescent Brain Cognitive DevelopmentSM Study, UK Biobank, and Spatial Topology project. These six datasets comprise more than 50,000 unique participants and 300,000 scans. We further benchmark our findings against motion distributions aggregated by MRIQC across more than 1.5 million scans. Under commonly applied strict exclusion thresholds, large fractions of participants would be removed (exceeding 80 % in the UK Biobank task data), and these removals were demographically structured, disproportionately excluding younger and older participants, those with higher BMI, and those with motion-associated clinical conditions. Respiratory pseudo-motion inflated estimates of head motion in adult cohorts, and applying notch filtering to remove respiratory frequencies from these estimates meaningfully reduced exclusion rates. Exclusion also carried downstream consequences. Strict thresholds reduced statistical power, inflated study costs, and altered the apparent predictability of behavioral phenotypes by removing a non-random, behaviorally distinct subgroup. These findings demonstrate that motion exclusion thresholds are not neutral quality-control decisions but structured selection mechanisms that reshape the composition of neuroimaging samples. We recommend that studies report the demographic characteristics of excluded participants, prefer data-driven censoring methods over fixed motion cutoffs, and clarify the target population while considering appropriate weighting techniques.

neuroscience↗

Effects of connectivity hyperalignment (CHA) on estimated brain network properties: from coarse-scale to fine-scale

Recent gains in functional magnetic resonance imaging (fMRI) studies have been driven by increasingly sophisticated statistical and computational techniques and the ability to capture brain data at finer spatial and temporal resolution. These advances allow researchers to develop population-level models of the functional brain representations underlying behavior, performance, clinical status, and prognosis. However, even following conventional preprocessing pipelines, considerable inter-individual disparities in functional localization persist, posing a hurdle to performing compelling population-level inference. Persistent misalignment in functional topography after registration and spatial normalization will reduce power in developing predictive models and biomarkers, reduce the specificity of estimated brain responses and patterns, and provide misleading results on local neural representations and individual differences. This study aims to determine how connectivity hyperalignment (CHA)--an analytic approach for handling functional misalignment--can change estimated functional brain network topologies at various spatial scales from the coarsest set of parcels down to the vertex-level scale. The findings highlight the role of CHA in improving inter-subject similarities, while retaining individual-specific information and idiosyncrasies at finer spatial granularities. This highlights the potential for fine-grained connectivity analysis using this approach to reveal previously unexplored facets of brain structure and function.

neuroscience↗