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Fahimipour, A. K.

Publications and source records attributed to Fahimipour, A. K..

2 recordsLinked to original sources

Omnivory does not preclude strong trophic cascades

Omnivory has been cited as an explanation for why trophic cascades are weak in many ecosystems, but empirical support for this prediction is equivocal. Compared to predators that feed only on herbivores, top omnivores -- species that feed on both herbivores and primary producers -- have been observed generating cascades ranging from strong, to moderate, null, and negative. To gain intuition about the sensitivity of cascades to omnivory, we analyzed models describing systems with top omnivores that display either fixed or flexible diets, two foraging strategies that are supported by empirical observations. We identified regions of parameter space wherein omnivores following a fixed foraging strategy, with herbivores and producers comprising a constant proportion of the diet, non-intuitively generate stronger cascades than predators that are otherwise demographically identical: (i) high productivity relative to herbivore mortality, and (ii) small discrepancies in producer versus herbivore reward create conditions in which cascades are stronger with moderate omnivory. In contrast, flexible omnivores that attempt to optimize per capita growth rates during search never induce cascades that are stronger than the case of predators. Although we focus on simple models, the consistency of these general patterns together with prior empirical evidence suggests that omnivores should not be uniformly ruled out as agents of strong trophic cascades.

ecology

Global-scale structure of the eelgrass microbiome

Plant-associated microorganisms are essential for their hosts' survival and performance. Yet, most plant microbiome studies to date have focused on terrestrial plant species sampled across relatively small spatial scales. Here we report results of a global-scale analysis of microbial communities associated with leaf and root surfaces of the marine eelgrass Zostera marina throughout its range in the Northern Hemisphere. By contrasting host microbiomes with those of their surrounding seawater and sediment communities, we uncovered the structure, composition and variability of microbial communities associated with Z. marina. We also investigated hypotheses about the mechanisms driving assembly of the eelgrass microbiome using a whole-genomic metabolic modeling approach. Our results reveal aboveground leaf communities displaying high variability and spatial turnover, that strongly mirror their adjacent coastal seawater microbiomes. In contrast, roots showed relatively low spatial turnover and were compositionally distinct from surrounding sediment communities -- a result largely driven by the enrichment of predicted sulfur-oxidizing bacterial taxa on root surfaces. Metabolic modeling of enriched taxa was consistent with an assembly process whereby similarity in resource use drives taxonomic co-occurrence patterns on belowground, but not aboveground, host tissues. Our work provides evidence for a core Z. marina root microbiome with putative functional roles and highlights potentially disparate processes influencing microbiome assembly on different plant compartments.

microbiology