Biology subjects

Evans, K. M.

Publications and source records attributed to Evans, K. M..

5 recordsLinked to original sources

bioRxiv2026

Evaluation of phage activity against diverse Enterococcus faecalis from infective endocarditis

Enterococcus faecalis is a leading cause of infective endocarditis, particularly in older and hospitalized patients. Treatment is challenging due to the intrinsic resistance of E. faecalis to many clinically important antibiotics and the increasing prevalence of multidrug-resistant strains. Bacteriophage (phage)-based therapies, including phage cocktails and phage-antibiotic combinations, offer a promising approach for treating resistant bacterial infections. In this study, we isolated ten novel phages from wastewater by screening on E. faecalis clinical isolates and tested phage activity both individually and in phage-phage and phage-antibiotic combinations against 18 E. faecalis clinical isolates collected from patients with infective endocarditis. We found that 15/18 (83%) isolates were susceptible to at least one phage tested, and that the same proportion of isolates were susceptible to a cocktail of three phages with complementary activities. We also observed improved bacterial growth inhibition and increased killing when phages were combined with ampicillin or daptomycin, two antibiotics commonly used to treat E. faecalis infections. Finally, we found that treatment with the three-phage cocktail improved the survival of Galleria mellonella infected with a pathogenic E. faecalis endocarditis isolate. Overall, these findings suggest that phages could be a helpful addition to the therapeutic repertoire for treating E. faecalis infective endocarditis. ImportanceNew approaches are needed for treating infective endocarditis, a life-threatening heart infection. Here we focus on Enterococcus faecalis, a resilient bacterium that is increasingly resistant to standard-of care antibiotic regimens, and explore the use of phage therapy for treating E. faecalis endocarditis. We found that combining phages together in a cocktail or pairing them with existing antibiotics can effectively kill E. faecalis clinical isolates from patients with infective endocarditis, and that treatment of infected waxworm moth larvae with a phage cocktail improved their survival. The results of this study contribute to the development of phage-based therapeutic approaches for E. faecalis endocarditis, which could ultimately lead to improved outcomes for patients facing this severe infection.

microbiology↗

bioRxiv2026

Convergent evolution of parrotfish beaks enables stress redistribution during high-force feeding

Convergent evolution is often interpreted as evidence that similar ecological challenges select for optimal functional solutions, yet the biomechanical mechanisms underlying such convergence remain poorly resolved. Parrotfishes independently evolved fused, beak-like dentition multiple times, a trait associated with feeding on hard substrates such as coral, but its advantage has not been quantified. Here, we combine finite element analysis with shockwave modeling to evaluate the performance of the beak during feeding. Across five species spanning independent evolutionary origins of beaked and non-beaked dentitions, we find that jaw opening is governed primarily by geometric scaling, with minimal influence from dentition morphology. In contrast, under stabilized biting, fused dentition reduces the rate of stress accumulation relative to discrete teeth, indicating a functional advantage under constrained loading. Shockwave modeling further shows that tooth geometry and stacking regulate stress propagation: smooth profiles reduce stress concentration, while stacked architectures localize stresses within the tooth material and limit transmission into the surrounding bone. These results suggest that convergent beak evolution in parrotfish reflects repeated optimization for stress management under constrained and impact loading, and reveals a general principle by which biological structures control internal force transmission during high-force feeding rather than maximize strength alone.

evolutionary biology↗

bioRxiv2026

Convergent reduction in skeletal density during benthic to pelagic transitions in Baikal sculpins

Habitat transitions are a major driver of morphological evolution. Teleost fishes have repeatedly transitioned from benthic to pelagic habitats, often evolving predictable changes in body shape that enhance hydrodynamic efficiency. While freshwater sculpins (Cottidae, Perciformes) are usually benthic, two genera in Lake Baikal, Comephorus and Cottocomephorus, have independently evolved into midwater niches. As sculpins lack a swim bladder, these lineages instead improved buoyancy through reduced skeletal density and increased lipid stores. Using micro-computed tomography and two-dimensional morphometrics, we characterized skeletal evolution across the Baikal sculpin radiation. We found that parallel changes in bone mineral density and microstructure independently evolved in the two pelagic clades. Density reductions occurred throughout the skull in pelagic species. The basibranchials and neurocranium exhibited the lowest overall bone density across all cranial elements. While the jaws maintained the highest absolute density values among the bones we measured, they also showed the greatest proportional reduction in density associated with pelagic habitat use, with a 56.86% decrease in percentage hydroxyapatite and a 21.39% increase in porosity. Morphometric analyses further identified convergence toward an elongate body shape, reduced and posteriorly shifted eyes, and elevated fin insertion in pelagic taxa. These results demonstrate a repeated skeletal lightening and body shape changes accompanying benthic-to-pelagic transitions. This pattern mirrors other benthic-to-pelagic transitions in teleosts that lack swim bladders, highlighting shared biomechanical and microstructural solutions to life in the open water.

evolutionary biology↗

bioRxiv2022

How to tuna fish: constraint, convergence and integration in the neurocranium of pelagiarian fishes.

Morphological evolution of the vertebrate skull has been explored across a wide range of tetrapod clades, but teleost fishes, accounting for roughly half of all vertebrate species, have largely been overlooked. Here we present the results of a study investigating three-dimensional morphological evolution across 114 species of Pelagiaria, a morphologically diverse clade of open-ocean teleost fishes that includes tuna and mackerel. Despite showing high shape disparity, the majority of taxa are concentrated in fairly restricted regions of morphospace, with taxa from all families falling into three distinct clusters. Phylogenetic signal in shape data is significant but low (Kmult = 0.27, p = 0.001) and a single-rate Ornstein-Uhlenbeck model of evolution is supported, revealing convergence in shape within and between families. Shape is significantly correlated with body elongation (R2 = 0.35, p =0.001), but correlation with size, diet, and habitat depth is weak. Integration of the neurocranium is high, supporting the hypothesis that high integration may promote the evolution of more extreme morphologies. Taken together, these results suggest that shape evolution in the pelagiarian neurocranium is constrained by a number of factors, resulting in the repeated evolution of a restricted range of morphologies.

evolutionary biology↗

bioRxiv2018

From Armament to Ornament: Performance Trade-Offs in the Sexual Weaponry of Neotropical Electric Fishes

The evolution of sexual weaponry is thought to have marked effects on the underlying static allometry that builds them. These weapons can negatively affect organismal survivability by creating trade-offs between trait size and performance. Here we use three-dimensional geometric morphometrics to study the static allometry of two species of sexually dimorphic electric fishes (Apteronotus rostratus and Compsaraia samueli) in which mature males grow elongate jaws used in agonistic male-male interactions. We quantify jaw mechanical advantage between the sexes of both species to track changes in velocity and force transmission associated with the development of sexual weaponry. We find evidence for trade-offs between skull shape and mechanical advantage in C. samueli, where males with longer faces exhibit lower mechanical advantages, suggesting weaker bite forces. In contrast, males, and females of A. rostratus exhibit no difference in mechanical advantage associated with facial elongation. We hypothesize that differences in the functionality of the sexual weaponry between the two species may drive divergences in the allometric scaling of mechanical advantage.

evolutionary biology↗