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Elven, H.

Publications and source records attributed to Elven, H..

2 recordsLinked to original sources

A chromosome-level genome assembly of the endangered northern dragonhead sap beetle, Thymogethes norvegicus (Easton, 1959)

The northern dragonhead sap beetle (Thymogethes norvegicus) is believed to be endemic to Norway and is classified as endangered. Its life cycle is closely tied to the host plant northern dragonhead (Dracocephalum ruyschiana), itself classified as vulnerable in Norway. Here, we present a chromosome-level genome assembly of a male T. norvegicus. The assembly comprises two pseudo-haplotypes, hap1 and hap2, of 1,142 and 1,109 Mb, with 96.3% and 96.8% scaffolded into chromosomes, respectively. Hap1 contains 8 autosomes and the X chromosome, while hap2 contains 8 autosomes. Assembly quality was high, with conserved single-copy ortholog completeness scores of 96.6% and 90.7% and combined k-mer completeness of 98.1%. A total of 13,484 and 12,550 protein-coding genes were annotated in hap1 and hap2, respectively. This assembly provides a valuable genomic resource for the conservation of this endangered endemic species totally dependent on the vulnerable plant, the northern dragonhead.

genomics↗

Clavis: an open and versatile identification key format

The skills and knowledge needed to recognize and classify taxa are becoming increasingly scarce in the scientific community. At the same time, it is clear that these skills are strongly needed in biodiversity monitoring for management and conservation, especially when carried out by citizen scientists. Formalizing the required knowledge in the form of digital identification keys is one way of making such knowledge more available for professional and amateur observers of biodiversity. In this paper we describe Clavis, an open and versatile data format for capturing the knowledge required for taxon identification through digital keys, allowing for a level of detail beyond that of any current key format. We present the format independently from any particular implementation, as our aim is for Clavis to serve as a basis for interoperable tools and interfaces serving different needs and actors.

ecology↗