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El-Sayed, W. M. M.

Publications and source records attributed to El-Sayed, W. M. M..

2 recordsLinked to original sources

Insight into the Impact of Air Flow Rate on Algal-Bacterial Granules: Reactor Performance, Hydrodynamics by Computational Fluid Dynamics (CFD) and Microbial Community Analysis

Algal-bacterial granules have been drawing attention in wastewater treatment due to their rapid settling ability and efficient nutrient removal performance. This study evaluated the impact of air flow rates on nitrogen removal and the formation of algal-bacterial granules in domestic wastewater treatment. The highest nitrogen removal efficiency was achieved by operating with two separate feedings and the addition of an external carbon source. The higher air flow rate resulted in a higher nitrification rate and produced smaller and more compact granules on average. However, increasing the air flow rate did not necessarily increase extracellular polymeric substances (EPS) production. Computational Fluid Dynamics (CFD) simulations revealed that mechanical mixing was the primary source of shear force. Increasing the air flow rate from 0.2 LPM to 0.5 LPM only yielded a 12% increment in the volume-averaged strain rate. Further analysis of microbial communities showed that changes in bioreactor operation, especially sodium acetate addition and aerations, shifted the microbial community composition. The sodium acetate addition led to the increase of microbial diversity and the relative abundance of denitrifiers such as Thauera, while the aeration caused the increasing relative abundances of nitrogen-related genera (such as Nitrospira) and the decreasing relative abundances of cyanobacteria and Chlorella in the long-term operation of the photobioreactors. Moreover, the decrease in total abundance of grazers and pathogens along with the operation, including Chytridiomycetes, Sessilida, and Operculariidae, might result from the shear force and the decrease of prokaryotic species, such as Chlorella spp.. HighlightsO_LIA higher air flow rate resulted in a higher nitrification rate. C_LIO_LIShear stress, microbial composition, and carbon source affected EPS production. C_LIO_LIIncreasing the air flow rate from 0.2 to 0.5 LPM led to only 12% of the increment of shear stress. C_LIO_LIMicrobial community differed with aeration rate and carbon source. C_LI Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=175 SRC="FIGDIR/small/589810v1_ufig1.gif" ALT="Figure 1"> View larger version (47K): org.highwire.dtl.DTLVardef@c6a7e1org.highwire.dtl.DTLVardef@37da84org.highwire.dtl.DTLVardef@eb362dorg.highwire.dtl.DTLVardef@31d122_HPS_FORMAT_FIGEXP M_FIG C_FIG

bioengineering↗

Disproportionate presence of adenosine in mitochondrial and chloroplast DNA of Chlamydomonas reinhardtii

Ribonucleoside monophosphates (rNMPs) represent the most common non-standard nucleotides found in the genomic DNA of cells. The distribution of rNMPs in DNA has been studied only in limited genomes, such as yeast nuclear and mitochondrial DNA, as well as human mitochondrial DNA. In this study, we used the ribose-seq protocol and the Ribose-Map bioinformatics toolkit to reveal the distribution of rNMPs incorporated into the whole genome of a photosynthetic unicellular green alga, Chlamydomonas reinhardtii. The study presents the discovery of a disproportionate incorporation of adenosine in the mitochondrial and chloroplast DNA, in contrast to the nuclear DNA, relative to the nucleotide content of these C. reinhardtii genomes. Our results demonstrate that the rNMP content in the DNA of the algal organelles reflects an elevated ATP level present in the algal cells. In addition, we reveal specific rNMP biases and patterns in the mitochondrial, chloroplast and nuclear DNA of C. reinhardtii.

molecular biology↗