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Dykes, G. F.

Publications and source records attributed to Dykes, G. F..

3 recordsLinked to original sources

Synthesis of C8-vinyl chlorophylls d and f impairs far-red light photoacclimation and growth under far-red light

The inducible biosynthesis of chlorophylls d and f enables a subset of specialised cyanobacteria to perform oxygenic photosynthesis under far-red light--in the absence of visible wavelengths--via a process termed far-red light photoacclimation. These pigments, like the more common chlorophylls a and b, typically carry an ethyl substituent at the C8 position of the macrocycle, formed by reduction of a vinyl group by an 8-vinyl reductase enzyme. Here, we disrupted the gene encoding BciB, an 8-vinyl reductase found in the majority of cyanobacteria, in Chroococcidiopsis thermalis PCC 7203, a model for the study of far-red light photoacclimation. Disruption of bciB results in the synthesis of 8-vinyl chlorophyll a when the cells are grown in white light; on switching to far-red light, synthesis of 8V-forms of chlorophylls d and f, which have not been detected in nature, are synthesised in this strain. The bciB mutant exhibits sensitivity to high irradiance under both light regimes. Pigment analysis and whole-cell absorption and fluorescence spectroscopy reveal decreased synthesis of far-red absorbing chlorophylls, reduced photosystem assembly and an impaired acclimation to far-red light, and transmission electron microscopy demonstrates altered thylakoid membrane morphology in the mutant when compared to the wild type. These results demonstrate the importance of 8-vinyl group reduction for acclimation to far-red light.

biochemistry↗

Bacteriophages from human skin infecting coagulase-negative Staphylococcus: diversity, novel species and host resistance

The human skin microbiome comprises diverse populations that differ temporally between body sites and individuals. The virome is a less studied component of the skin microbiome and the study of bacteriophages is required to increase knowledge of the modulation and stability of bacterial communities. Staphylococcus species are among the most abundant colonisers of skin and are associated with both health and disease yet the bacteriophages infecting the most abundant species on skin are less well studied. Here, we report the isolation and genome sequencing of 40 bacteriophages from human skin swabs that infect coagulase-negative Staphylococcus (CoNS) species, which extends our knowledge of phage diversity. Six genetic clusters of phages were identified with two clusters representing novel phage species, one of which we characterise and name Alsa phage. We identified that Alsa phages have a greater ability to infect the species S. hominis that was otherwise infected less than other CoNS species by the isolated phages, indicating an undescribed barrier to phage infection that could be in part due to numerous restriction-modification systems. The extended diversity of Staphylococcus phages here enables further research to define their contribution to skin microbiome research and the mechanisms that limit phage infection.

microbiology↗

Intrinsically disordered CsoS2 acts as a general molecular thread for α-carboxysome shell assembly

Carboxysomes are a paradigm of self-assembling proteinaceous organelles found in nature, offering compartmentalisation of enzymes and pathways to enhance carbon fixation. In -carboxysomes, the disordered linker protein CsoS2 plays an essential role in carboxysome assembly and Rubisco encapsulation. Its mechanism of action, however, is not fully understood. Here we synthetically engineered -carboxysome shells using minimal shell components and determined cryoEM structures of these to decipher the principle of shell assembly and encapsulation. The structures reveal that the intrinsically disordered CsoS2 C-terminus is well-structured and acts as a universal "molecular thread" stitching through multiple shell protein interfaces. We further uncovered in CsoS2 a remarkable highly conserved repetitive key interaction motif, [IV]TG, which is critical to the shell assembly and architecture. Our study provides a general mechanism for the CsoS2-govern carboxysome shell assembly and cargo encapsulation and further advances synthetic engineering of carboxysomes for diverse biotechnological applications.

microbiology↗