Biology subjects

Dumas, L.

Publications and source records attributed to Dumas, L..

6 recordsLinked to original sources

bioRxiv2026

Neocortical astrocyte diversity stems from distinct developmental origins

Key regulators of neural network activity in multiple advanced cognitive processes and essential components of the blood-brain barrier, astrocytes constitute a highly heterogeneous population at the morphological, molecular, and functional levels. However, how this diversity arises during mammalian brain development remains poorly investigated. Here, using a combination of multicolour genetic fate mapping, single-cell transcriptomic analyses, multichannel large-volume imaging and detailed 3D cell morphology reconstructions, we uncover a discrete subpopulation of neocortical astrocytes generated from an early restricted embryonic domain located outside of the dorsal pallium. Besides their separate lineage from pyramidal neurons, these astrocytes exhibit a developmental trajectory that differs from astrocytes produced by dorsal cortical progenitors, including different migratory pathways, spatial distributions and morphology. Overall, our results reveal the diversity of embryonic sources responsible for neocortical astrocyte genesis and provide key insights into the unsuspected complex developmental processes that underlie cortical astrocyte heterogeneity.

neuroscience↗

bioRxiv2025

Molecular characterization of an adhesion GPCR signal transduction

Key cellular processes rely on the transduction of extracellular mechanical signals by specialized membrane receptors, including adhesion G-protein-coupled receptors (aGPCRs). While recent studies support aGPCR activation via shedding of the extracellular GAIN domain, shedding-independent signaling mechanisms have also been observed. However, the molecular basis underlying these distinct activation modes remains poorly understood. Here, we integrate single-molecule force spectroscopy, molecular dynamics simulations, and cell-based assays to elucidate the structural and dynamic mechanisms of ADGRG1 mechanotransduction. We show that shear stress induces distinct deformation pathways in the isolated GAIN domain, promoting tethered agonist (TA) exposure through loop rearrangements prior to domain shedding. In the full-length receptor, defined GAIN orientations and specific loop contacts with the 7-transmembrane (7TM) core enable allosteric TA engagement and signaling in the absence of GAIN dissociation. The directionality of the applied force dictates the activation pathway, favoring either GAIN shedding or intact GAIN-7TM coupling. These mechanisms align with both the basal activity and collagen-enhanced signaling of ADGRG1. Using deep learning-guided design, we engineered GAIN variants with tailored mechanical sensitivity, validating our model through predictable shifts in constitutive and ligand-induced signaling. Together, our findings establish a unified framework for aGPCR activation governed by GAIN dynamics and orientation, bridging mechanical and allosteric models of receptor function and providing new strategies for engineering mechanosensitive receptors and precision therapeutics.

biophysics↗

bioRxiv2025

Hepatic ADMA/PRMT1 axis regulation is associated with NO-dependent endothelial dysfunction in MASH

Metabolic dysfunction-associated steatohepatitis (MASH) is a severe form of fatty liver disease and a recognized cardiovascular risk factor, yet the mechanisms linking hepatic pathology to vascular dysfunction remain poorly understood. We aimed to investigate whether MASH impairs endothelial function via nitric oxide (NO)-dependent mechanisms and to identify potential liver-derived mediators involved in this process. Endothelial function was assessed in two murine MASH models, Foz mice fed a high-fat diet and C57BL/6JRj mice fed a western diet with fructose, by using wire myography, while blood pressure was monitored via telemetry. NO pathway was further investigated through eNOS expression and activation and Hb-NO measurements. ADMA metabolism was analyzed in both liver tissue and plasma by LC-MS and gene expressions. Additionally, bovine aortic endothelial cells (BAECs) were treated with mouse plasma to measure the circulating factors effects on eNOS activation and the role of oxidative stress. Both models exhibited impaired NO-dependent vasorelaxation without evidence of atherosclerosis. In Foz mice, this impairment was associated with reduced eNOS expression and activation. Surprisingly, plasma Hb-NO levels did not reflect vascular NO deficiency, likely due to elevated hepatic iNOS expression. In both models, hepatic and plasma ADMA levels were increased, concomitant with hepatic upregulation of Prmt1. BAECs exposed to plasma from MASH mice showed reduced eNOS activation independent of oxidative stress. Our findings reveal that MASH is consistently associated with NO-dependent endothelial dysfunction, with ADMA emerging as a key liver-derived mediator. The PRMT1/ADMA/NO axis may represent a mechanistic link between liver pathology and vascular impairment, positioning ADMA as a potential biomarker and therapeutic target for cardiovascular risk associated with MASH. HighlightsO_LIMASH is associated with impaired NO-dependent endothelial function in two distinct MASH models. C_LIO_LICirculating factors disrupt the NOS/NO pathway independently of oxidative stress C_LIO_LIReduced plasma Hb-NO levels do not accurately reflect NO-dependent endothelial dysfunction in a context of MASH. C_LIO_LIElevated plasma and hepatic ADMA levels associated with hepatic prmt1 upregulation are consistently observed in both MASH models. C_LIO_LIThe PRMT1/ADMA/NO axis emerges as a key liver-mediated mechanism driving endothelial dysfunction in MASH C_LI

physiology↗

bioRxiv2024

RNA G-quadruplex dynamic steers the crosstalk between protein synthesis and energy metabolism

Cancer cells rely on mitochondria for their bioenergetic supply and macromolecule synthesis. Central to mitochondrial function is the regulation of mitochondrial protein synthesis, which primarily depends on the cytoplasmic translation of nuclear-encoded mitochondrial mRNAs whose protein products are imported into mitochondria. Despite the growing evidence that mitochondrial protein synthesis contributes to the onset and progression of cancer, and can thus offer new opportunities for cancer therapy, knowledge of the underlying molecular mechanisms remains limited. Here, we show that RNA G-quadruplexes (RG4s) regulate mitochondrial function by modulating cytoplasmic mRNA translation of nuclear-encoded mitochondrial proteins. Our data support a model whereby the RG4 folding dynamics, under the control of oncogenic signaling and modulated by small molecule ligands or RG4-binding proteins, modifies mitochondria-localized cytoplasmic protein synthesis. Ultimately, this impairs mitochondrial functions, affecting energy metabolism and consequently cancer cell proliferation.

cancer biology↗

bioRxiv2023

The stromal side of cytochrome b6f complex regulates state transitions

In oxygenic photosynthesis, state transitions distribute light energy between Photosystem I and Photosystem II. This regulation involves the reduction of the plastoquinone pool, activation of the STT7 protein kinase by cytochrome b6f complex, phosphorylation and migration of Light Harvesting Complexes II (LHCII). Here we show the C-term of cyt b6 subunit acts on phosphorylation of STT7 and state transitions. We used site-directed mutagenesis of the chloroplast petB gene to truncate (remove L215b6) or elongate (add G216b6) the cyt b6 subunit. Modified complexes are devoid of heme ci and degraded by FTSH protease, revealing that salt bridge formation between cyt b6 (PetB) and subunit IV (PetD) is key to the assembly of the complex. In double mutants where FTSH is inactivated, modified cyt b6f are accumulated but the phosphorylation cascade is blocked. We also replaced the arginine interacting with heme ci propionate (R207Kb6). In this modified complex, heme ci is present but the kinetics of phosphorylation are slower. We show that highly phosphorylated forms of STT7 are accumulated transiently after reduction of the PQ pool, and represent the active forms of the protein kinase. 96% protein coverage using phosphoproteomics showed 4 new phosphorylated peptides in the kinase domain of STT7. Phosphorylation of the LHCII targets is favored at the expense of the protein kinase, and the migration of LHCII towards PSI is the limiting step for state transitions. Significance statementState transitions are regulatory mechanisms that optimize the quantum yield of photosynthesis. Chlamydomonas reinhardtii is the choice organism to study this regulation at the molecular level. Our study describes an unprecedented mechanism of stereochemical changes at the Qi site of the cytochrome b6f complex that trigger STT7 protein kinase activation through autophosphorylation.

plant biology↗

bioRxiv2023

Uncovering and engineering the mechanical properties of the adhesion GPCR ADGRG1 GAIN domain

Key cellular functions depend on the transduction of extracellular mechanical signals by specialized membrane receptors including adhesion G-protein coupled receptors (aGPCRs). While recently solved structures support aGPCR activation through shedding of the extracellular GAIN domain, the molecular mechanisms underpinning receptor mechanosensing remain poorly understood. When probed using single-molecule atomic force spectroscopy and molecular simulations, ADGRG1 GAIN dissociated from its tethered agonist at forces significantly higher than other reported signaling mechanoreceptors. Strong mechanical resistance was achieved through specific structural deformations and force propagation pathways under mechanical load. ADGRG1 GAIN variants computationally designed to lock the alpha and beta subdomains and rewire mechanically-induced structural deformations were found to modulate the GPS-Stachel rupture forces. Our study provides unprecedented insights into the molecular underpinnings of GAIN mechanical stability and paves the way for engineering mechanosensors, better understanding aGPCR function, and informing drug-discovery efforts targeting this important receptor class.

biophysics↗