Biology subjects

Duda, J.-P.

Publications and source records attributed to Duda, J.-P..

4 recordsLinked to original sources

bioRxiv2023

Organic matter influence on ooid formation: New insights into classic examples (Great Salt Lake, USA; Triassic Germanic Basin, Germany)

Ooids are particles composed of a tangential or radial cortex growing around a nucleus. They are common in carbonate deposits of almost any geological age and provide insights into environmental conditions. However, abiotic or biotic factors influencing their formation remain unclear. This study aims to advance our understanding of ooid formation with a multi- analytical approach (e.g., FE-SEM, Raman spectroscopy, -XRF) to classic examples from Great Salt Lake (GSL; USA) and the Lower Triassic Germanic Basin (GB; Germany). Both deposits represent hypersaline shallow-water environments where ooids are closely associated with microbial mats. GSL ooids are dominantly 0.2-1 mm in size, ellipsoidal to subspherical in shape, composed of aragonite, and contain organic matter (OM). GB ooids are mainly [≤]4 mm in size, spherical to subspherical in shape, composed of calcite, and currently contain little OM. Despite the differences, both ooids have the same cortex structures, likely reflecting similar formation processes. Some GSL ooids formed around detrital grains while others exhibit micritic particles in their nuclei. In GB ooids, detrital nuclei are rare, despite the abundance of siliciclastic particles of various sizes in the host rocks. GB deposits also include "compound ooids", i.e., adjacent ooids that coalesced with each other during growth, suggesting static in-situ development, which is supported by the lack of detrital grains as nuclei. GB ooids also grew into laminated microbial crusts with identical microstructures, further indicating a static formation. Such microbial crusts typically form through mineral precipitation associated with OM (e.g., extracellular polymeric substances), suggesting a similar formation pathway for ooids. The inferred key-role of OM is further supported by features in radial ooids from the GSL, which commonly exhibit, from their nuclei towards their surface, increasing OM contents and decreasing calcification.

paleontology↗

bioRxiv2021

Paleoecological implications of Lower-Middle Triassic stromatolites and microbe-metazoan build-ups in the Germanic Basin: Insights into the aftermath of the Permian - Triassic crisis

The aftermath of the Permian - Triassic crisis is characterized by ubiquitous occurrences of microbial sediments around the world. For instance, Triassic deposits of the Germanic Basin have shown to provide a rich record of stromatolites as well as of microbe-metazoan build-ups with non-spicular demosponges. Despite their paleoecological significance, however, all of these microbialites have only rarely been studied. This study aims to fill this gap by examining and comparing microbialites from the Upper Buntsandstein (Olenekian, Early Triassic) and the lower Middle Muschelkalk (Anisian, Middle Triassic). By combining analytical petrography (optical microscopy, micro X-ray fluorescence, Raman spectroscopy) and geochemistry ({delta}13Ccarb, {delta}18Ocarb), we show that all studied microbialites formed in hypersaline lagoons to sabkha environments. Olenekian deposits in Jena and surroundings and Anisian strata at Werbach contain stromatolites. Anisian successions at Hardheim, in contrast, host microbe-metazoan build-ups. Thus, the key-difference is the absence or presence of non-spicular demosponges in microbialites. After the Permian - Triassic crisis, the widespread microbialites (e.g., stromatolites/microbe-metazoan build-ups) possibly resulted from suppressed ecological competition and occupied the vacant ecological niche. It seems plausible that microbes and non-spicular demosponges had a mutualistic relationship and it is tempting to speculate that the investigated microbial-metazoan build-ups reflect an ancient evolutionary and ecologic association. Furthermore, both microbes and non-spicular demosponges may benefit from elevated salinities. Perhaps it was minor differences in salinities that controlled whether or not non-spicular demosponges could develop.

paleontology↗

bioRxiv2020

Revisiting the phosphorite deposit of Fontanarejo (central Spain): new window into the early Cambrian evolution of sponges and into the microbial origin of phosphorites

Fossils within early Cambrian phosphorites worldwide are often well preserved due to early diagenetic permineralization. Here, we examine the fossil record contained within phosphorites of the Lower Cambrian Pusa Formation (late Fortunian to Cambrian Stage 2) in Fontanarejo, central Spain. The sedimentology and age of these phosphorites have been controversial and are here reviewed and discussed, providing also a updated geological map. The Pusa Formation is composed of fine clastic sediments that are partly turbiditic, with channels of quartz-rich conglomerates and abundant phosphorites in the upper part of the succession. The microfacies and mineralogy of these channel deposits are studied here for the first time in detail, showing that they are mainly composed of subspherical apatite clasts, with minor mudstone intraclasts, quartzite and mica grains. Numerous sponge spicules, as well as entirely preserved hexactinellid sponges and demosponges, were collected within these phosphorites and likely represent stem groups. In addition to sponges, other fossils, such as small shelly fossils (SSF) of the mollusk Anabarella sp., were found. The phosphorites exhibit multiple evidence of intense microbial activity, including diverse fabrics (phosphatic oncoidal-like microbialites, thrombolites, stromatolites, and cements) and abundant fossils of filamentous microbes that strongly resemble sulfur oxidizing bacteria. Our findings strongly suggest that microbial processes mediated the rapid formation of most of the Fontanarejo apatite, probably accounting for the exceptional preservation of fragile fossils such as sponge skeletons. The apparent presence of taxonomically diverse hexactinellid and demosponge communities by the lowermost Cambrian further corroborates a Precambrian origin of the phylum Porifera.

paleontology↗

bioRxiv2020

Sedimentary factories and ecosystem change across the Permian-Triassic Critical Interval (P-TrCI) - insights from the Xiakou area (South China)

The Permian-Triassic mass extinction included a potentially catastrophic decline of biodiversity, but ecosystem change across this event remains poorly characterized. Here we reconstruct sedimentary factories and ecosystem change across the Permian-Triassic Critical Interval (P-TrCI) in the Xiakou area (South China). Six microfacies (MF) were classified. The succession begins with a eukaryote-controlled carbonate factory (MF-1) that passes upward into an organomineralization-dominated carbonate factory (MF-2-3). Organic-rich marls atop these units reflect carbonate factory collapse (MF-4). Organomineralization-driven carbonate formation restarts prior to the Permian-Triassic boundary (MF-5) and subsequently develops into a mixed carbonate factory where organomineralization and biomineralization are almost equally important (MF-6). MF-1 reflects oxygenated shallow water environments. In contrast, MF-2-6 were all deposited in somewhat deeper environments, some of which episodically exhibited elevated salinities, oxygen depletion, and, possibly, euxinic conditions. Our results demonstrate that distinct changes in carbonate production styles, biodiversity, and environmental conditions are not synchronous at Xiakou. Furthermore, the Xiakou record is strikingly different to that of other localities, even from the same area (e.g., the Global Stratotype Section and Point section at Meishan). Together, these findings highlight the enormous complexity of the P-TrCI and calls simplified views of the Permian-Triassic mass extinction into question.

paleontology↗