Biology subjects

Duchatel, F.

Publications and source records attributed to Duchatel, F..

2 recordsLinked to original sources

bioRxiv2023

Importance of wildlife in the circulation and maintenance of SAT1 and SAT2 foot-and-mouth disease viruses in Africa

Author summaryFoot and mouth disease (FMD) viruses are endemic in sub-Saharan Africa. Due to the complexity of the disease epidemiology and the lack of available data, there is a need to use phylogenetic approaches to understand the role of potential hosts involved in the circulation and maintenance of the viruses. The uneven host sampling of the available sequences requires us to take advantage of the recent advances in phylogenetic reconstruction. Therefore, using two structural coalescent model approximations we estimated the circulation of FMD virus serotypes SAT1 and SAT2 between cattle, buffalo and impala populations. Our results suggest that in Africa, the impala population seems to act as an intermediate host between the cattle and buffalo populations and play a more important role in the circulation of the viruses than was previously suspected. Until now, the role of the impala population in the circulation of FMDV has been suggested, but never explicitly shown.

molecular biology↗

bioRxiv2018

Circulation of Foot-and-Mouth Disease Virus in Africa and identification of the underlying constraints using Phylogeographic methods

Foot and mouth disease (FMD) is endemic in sub-Saharan Africa and can lead to important and continuous economic losses for affected countries. Due to the complexity of the disease epidemiology and the lack of data there is a need to use inferential computational approaches to fill the gaps in our understanding of the circulation of FMD virus on this continent. Using a phylogeographic approach we reconstructed the circulation of FMD virus serotypes A, O and SAT2 in Africa and evaluated the influence of potential environmental and anthropological predictors of virus diffusion. Our results show that over the last hundred year the continental circulation of the tree serotypes was mainly driven by livestock trade. Whilst our analyses show that the serotypes A and O were introduced in Africa trough livestock trades, the SAT2 serotype probably originates from African wildlife population. The circulation of serotype O in eastern Africa is impacted by both indirect transmission through persistence in the environment and anthropological activities such as cattle movements.

evolutionary biology↗