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Dizaji, A. S.

Publications and source records attributed to Dizaji, A. S..

5 recordsLinked to original sources

Input variability taps on invariant representations to enable generalization in visual perceptual learning

Stimulus and location specificity are long considered hallmarks of visual perceptual learning. This renders visual perceptual learning distinct from other forms of learning, where generalization can be more easily attained, and unsuitable for practical applications, where generalization is key. Based on hypotheses derived from the structure of the visual system, we test here whether stimulus variability can unlock generalization in perceptual learning. We train subjects in orientation discrimination, while we vary the amount of variability in a task-irrelevant feature, spatial frequency. We find that independently of task difficulty, this manipulation enables generalization of learning to new stimuli and locations, while not negatively affecting the overall amount of learning on the task. We then use deep neural networks to investigate how variability unlocks generalization. We find that networks develop invariance to the task-irrelevant feature when trained with variable inputs. The degree of learned invariance strongly predicts generalization. A reliance on invariant representations can explain variability-induced generalization in visual perceptual learning, suggests new targets for understanding the neural basis of perceptual learning in high-order visual cortex, and presents an easy to implement modification of common training paradigms that may benefit practical applications.

neuroscience↗

TraceMontage: a Method for Merging Multiple Independent Neuronal Traces

BackgroundThe ability to reconstruct neuronal networks, local microcircuits, or the entire connectome is a central goal of modern neuroscience. Recently, advancements in sample preparation (e.g., sample expansion and Brainbow labeling) and optical (e.g., confocal and light sheet) techniques have enabled the imaging of increasingly large neural systems with high contrast. Tracing neuronal structures from these images proves challenging, however, necessitating tools that integrate multiple neuronal traces, potentially derived by various methods, into one combined (montaged) result.\n\nNew MethodHere, we present TraceMontage, an ImageJ/Fiji plugin for the combination of multiple neuron traces of a single image, either redundantly or non-redundantly. Internally, it uses graph theory to connect topological patterns in the 3-D spatial coordinates of neuronal trees. The software generates a single output tracing file containing the montage traces of the input tracing files and provides several measures of consistency analysis among multiple tracers.\n\nResults and Comparison to existing method(s)To our knowledge, our software is the first dedicated method for the combination of tracing results. Combining multiple tracers increases the accuracy and speed of tracing of densely-labeled samples by harnessing collaborative effort. This utility is demonstrated using fluorescence microscope images from the hippocampus and primary visual cortex (V1) in Brainbow-labeled mice.\n\nConclusionsTraceMontage provides researchers the ability to combine neuronal tracing data generated by either the same or different method(s). As datasets become larger, the ability to trace images in this parallel manner will help connectomics scale to increasingly larger neural systems.

neuroscience↗

Resting-state fMRI Signals of Intelligent People Wander in a Larger Space

Natural intelligence is one of the vastly explored research areas in cognitive science. Its evolution and manifestation through behavioral patterns in animal kingdom have been extensively investigated. Since early days of cognitive sciences, there have been considerable efforts to simulate intelligent behaviors through high-level cognitive models. In the framework of the computational theory of mind, production systems are top-down models which simulate intelligent behaviors by invoking their behavioral manifestations. These models describe an intelligent behavior as structured mental programming which decomposes a complex task into simpler independent parts, each one represented by a cognitive enclosure where attention is sequentially devoted, and finally the information obtained from all cognitive enclosures is integrated to accomplish the task. In this article, we investigate the relations between these models of intelligence and resting-state fMRI signals. Based on these models, we hypothesize that the capacity of distinct mental representations is the core feature of intelligent behaviors. Therefore, we reason that resting-state fMRI signals of intelligent individuals wander in a larger space and can be divided to more well-separated independent components. This may be interpreted as the functional equivalence of one of the most celebrated structural correlates of intelligence, its positive association with the total brain volume. In the general framework of topological data analysis, using a well-established non-linear dimensionality reduction method, we show that indeed resting-state fMRI signals of intelligent individuals occupy a larger space and can be divided to more well-separated components with less connections in the reduced two-dimensional space. To our knowledge, this is the first attempt to relate the functional space of resting-state fMRI signals with the behavioral signatures of the human intelligence.

neuroscience↗

Neuronal tracing and analysis by multispectral tracing in densely labeled mouse brain

Accurate and complete neuronal wiring diagrams are necessary for understanding brain function at many scales from long-range interregional projections to microcircuits. Traditionally, light microscopy-based anatomical reconstructions use monochromatic labeling and therefore necessitate sparse labeling to eliminate tracing ambiguity between intermingled neurons. Consequently, our knowledge of neuronal morphology has largely been based on averaged estimations across many samples. Recently developed second-generation Brainbow tools promise to circumvent this limitation by revealing fine anatomical details of many unambiguously identifiable neurons in densely labeled samples. Yet, a means to quantify and analyze the information is currently lacking. Therefore, we developed nTracer, an ImageJ plugin capable of rapidly and accurately reconstructing whole-cell morphology of large neuronal populations in densely labeled brains.

neuroscience↗

A Change-point Analysis Method for Single-trial Study of Simultaneous EEG-fMRI of Auditory/Visual Oddball Task

Simultaneous EEG-fMRI has been vastly used to investigate functional networks of brain combining high spatial resolution (millimeter) of fMRI with high temporal resolution (millisecond) of EEG. However, to extract the most relevant information from the acquired data, it is necessary to develop analysis methods with less ad hoc assumptions. To this end, brain rhythms are often used which are the specific frequency-bands of EEG signal and assumed to represent diverse sub-second cognitive processes at different parts of the cortex. Furthermore, single-trial analysis of EEG is believed to show more realistic picture of ongoing and event-related activities of brain. Here, we present a nonparametric multiple change-point detection and estimation method for the single-trial analysis of simultaneous EEG-fMRI experiment recorded during auditory and visual oddball tasks. In a simple attention task like oddball, the frontal cortex of brain is responsible to distinguish and respond appropriately to target versus standard events. By using EEG signal at the frontal cortex, we show that the -band activity changes according to \"inhibition timing\" hypothesis and the {beta}-band activity is in line with \"maintaining the status quo\" hypothesis. Furthermore, using these activities to build regressors in the GLM analysis of fMRI, we localize active brain regions with high spatial and temporal resolutions and elaborate further on the coordination of attentional networks across brain.

neuroscience↗