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Dias, R. V.

Publications and source records attributed to Dias, R. V..

2 recordsLinked to original sources

Experimental Validation of Coiled-Coil Architecture and Folding Dynamics in the Golgin Bug1

Golgins are widely described as long coiled-coil proteins that contribute to the structural organisation and trafficking functions of the Golgi apparatus. Although experimental structures have been determined for a limited number of golgin regions, atomic-level information on their extended coiled-coil segments remains scarce, and the oligomeric state, topology, and register of most predicted regions remain unestablished. Here, we characterise a predicted coiled-coil region of the yeast golgin Bug1 (BUG1cc) using structural, biophysical, and computational approaches. X-ray crystallography revealed a parallel, in-register dimeric coiled-coil containing ten heptad repeats and a predominantly hydrophobic core, with specific polar interactions contributing to dimer stabilisation. In solution, BUG1cc was dimeric under SEC-MALS conditions and remained highly alpha-helical across the pH and ionic strength conditions examined. CD measurements revealed pronounced scan-rate-dependent hysteresis, while DSC independently confirmed an asymmetry between heating and cooling transitions. Increasing protein concentration shifted both apparent transition temperatures while preserving thermal hysteresis, supporting chain association and conformational rearrangements in structural recovery. Structure-based simulations indicated that interface contacts and intra-chain helicity are thermodynamically coupled and melt as a single cooperative unit, and that the monomer released on dissociation is compact and only partially helical, so that reassociation proceeds through a coupled folding-binding mechanism whose rate-limiting step is conformational rather than bimolecular. Together, these results establish the molecular architecture of a predicted coiled-coil region of Bug1 and reveal a complex folding landscape in which oligomerisation, secondary-structure recovery, and kinetic barriers are tightly coupled.

biophysics↗

Beyond signaling activation: Phosphorylation modulates Grb2 phase separation to create multivalent scaffolds

The Growth Factor Receptor-Bound Protein 2 (Grb2) is a central adaptor protein in signal transduction pathways, yet how its monomer-dimer equilibrium governs its supramolecular organization remains elusive. Here, we demonstrate that the oligomeric state of Grb2 acts as a binary switch for Liquid-Liquid Phase Separation (LLPS). While the auto-inhibited homodimer forms only transient, thermodynamically unstable assemblies in crowding conditions, the phosphorylation-mimetic monomer (Y160E) drives the formation of robust, gel-like condensates. Integrating turbidity assays, temperature-controlled dynamic light scattering, fluorescence recovery after photobleaching (FRAP), hyperspectral imaging analyses, and coarse-grained molecular dynamics simulations, we reveal that this phase transition is enthalpy-driven and reliant on a specific electrostatic network between the SH2 domain residue R142 and a C-terminal SH3 acidic cluster (Q170-D172). Crucially, we show that these monomeric condensates function as "scaffolds" that efficiently recruit and sequester cytosolic wild-type dimers ("clients") into the dense phase. This recruitment mechanism resolves the paradox of how non-condensing wild-type proteins participate in phase separation. Our findings propose a novel regulatory model where phosphorylation nucleates the formation of high-density signaling hubs, redefining Grb2 from a passive adaptor to a dynamic spatial organizer of the Ras/MAPK pathway.

biophysics↗