Biology subjects

Demuru, M.

Publications and source records attributed to Demuru, M..

11 recordsLinked to original sources

bioRxiv2026

Structural topology shapes regional roles in neuronal avalanche initiation and termination

Whole-brain dynamics unfold as fast, discrete, transient events known as, neuronal avalanches, whose propagation is constrained by the connectome, that is, the large-scale scaffolding of structural connections wiring the brain. However, the role of the connectome in determining the topographies of the start and end of these transient cascades remains unclear. Leveraging resting-state Magnetoencephalography (MEG) recordings and diffusion magnetic resonance imaging (dMRI) tractography across 42 healthy individuals, we examined whether the structural architecture of white matter tracts dictates the spatial origins and the end of cortical avalanches. We found that the probability of triggering and finishing an avalanche is strongly related to the structural nodal strength, showing a positive correlation that is highly robust to non-parametric spatial permutation testing and bootstrapping. This structure-function coupling is highly stable and robust across different activation thresholds, demonstrating that the choice of avalanche extraction threshold does not drive or alter our main findings. Collectively, our results suggest that structural properties determine a region's propensity to initiate and terminate neuronal avalanches.

neuroscience↗

bioRxiv2026

Temporal persistence and structural organization of neuronal avalanche dynamics

Brain activity can be understood as a sequence of neuronal avalanches, i.e., transient episodes of coordinated activation that emerge across scales, from individual neurons and local networks to whole-brain dynamics. Avalanches are typically characterized by features such as size, duration, number of active components, and the silent time separating consecutive events. Although these features have been extensively characterized through their marginal distributions, their temporal organization and dependence on the underlying brain architecture remain poorly understood, leaving us without a framework for embedding neuronal avalanches within slower brain dynamics. Here, we analyzed eyes-closed resting-state magnetoencephalography recordings and the corresponding structural connectomes from 30 healthy participants to investigate the dynamics of avalanche sizes and silent times. We found that large avalanches preferentially followed short silent times, whereas small avalanches were more likely to occur after long silent periods. Based on the empirical joint distributions of avalanche size and silent time, we could define four types of events occurring above chance levels (avalanche large or small, preceding pause long or short). Mixed categories, combining a small value of one feature with a large value of the other, occurred more frequently than expected, while same-category events happened less often than chance. Furthermore, consecutive events tended to remain in the same category, a phenomenon referred to as persistence. We next investigated whether a brain region's connectivity profile shapes its propensity to participate in avalanches of different sizes. More strongly connected regions participated most often in small avalanches, whereas weakly connected regions were preferentially recruited during large avalanches. This pattern may reflect the greater sensitivity of highly connected hubs to fluctuations propagating through the network, resulting in frequent but spatially contained events. By contrast, the recruitment of more peripheral regions may require broader and stronger collective activity, occurring only during rarer, large-scale avalanches. In contrast, regional participation showed no clear association with the silent time preceding an avalanche. Together, these findings show that neuronal avalanches are neither temporally independent nor anatomically unconstrained: their sequence retains a memory of preceding events, while structural topology shapes which regions are recruited as avalanches grow. By connecting avalanche dynamics with slower temporal organization and the structural connectome, our results provide a multiscale framework for understanding how transient events are embedded within ongoing brain activity.

neuroscience↗

bioRxiv2026

Departure from OFF-State Microstate Dynamics Tracks Levodopa Response in Parkinson's Disease

Although dopaminergic therapies in Parkinsons disease primarily restore dopamine within nigrostriatal circuits, symptoms are better indexed by whole-brain dynamics than by local activity. In this manuscript, we hypothesize that L-Dopa therapy affects whole-brain dynamics alike, which in turn relate to clinical improvement. To test this hypothesis, we conducted a repeated-measures, source-reconstructed MEG study in 13 bradykinetic-dominant PD patients, recording resting-state cortical activity OFF medication and [~]1 hour after levodopa administration (ON). We characterize brain dynamics using a microstate framework, in which transition probabilities between microstates are used to contrast pathological OFF-state dynamics with those in the ON-state. Microstate dynamics were stable within medication states but reconfigured by L-Dopa, with greater departures from the OFF-state pattern associated, at the individual level, with larger clinical improvements. Our results suggest that individualized changes in microstate dynamics may serve as a neurophysiological marker of dopaminergic responsiveness.

neuroscience↗

bioRxiv2026

Data-driven gait cycle decomposition based on whole-body coordination dynamics

The study of human locomotion has long relied on descriptive frameworks of the gait cycle, which have provided essential insights into the functional phases of walking and their underlying biomechanical demands. While these models remain highly informative, they are largely based on observational analyses and may not fully capture the continuous, global coordination that characterizes human movement. The present study proposes an integrated framework to study whole-body coordination. This framework combines network theory with non-negative matrix factorization (NNMF) to treat gait as a dynamic system of coordinated joint interactions. Using three-dimensional kinematic data from 60 healthy subjects, we constructed a representation of whole-body coordination across time, named "dynamic kinectome". It was then decomposed using NNMF to extract spatial patterns of joint coordination and their corresponding temporal activations, allowing for an interpretable characterization of locomotor organization while preserving physiological meaning. Our analysis extracted six robust, highly consistent, and symmetrical coordination patterns across participants, effectively capturing the primary functional subtasks of locomotion. Rather than challenging classical phase descriptions, these findings enrich them by showing how coordination emerges as a continuous, often proactive process that can extend across conventional phase boundaries and systematically integrates the upper limbs for dynamic stability. Overall, this study provides a holistic, data-driven perspective on human locomotion, offering a promising basis for future investigations in motor control and may contribute to the development of sensitive biomarkers for clinical and rehabilitative applications.

bioengineering↗

bioRxiv2026

Hormone-Dependent Microstates and the Reconfiguration of Resting-State Dynamics across the Menstrual Cycle

While behavioral fluctuations across the menstrual cycle (MC) are well-documented, the neural underpinnings of these changes remain elusive. This study investigated the hypothesis that cyclic variations in sex hormones modulate large-scale brain activation patterns. To test this, longitudinal magnetoencephalographic (MEG) recordings were acquired and source reconstructed from 24 naturally cycling women across three distinct MC phases: early follicular, peri-ovulatory, and mid-luteal. Microstate analysis was employed to characterize large-scale cortical dynamics as "visits" to specific global configurations (i.e., maps) of brain activity. Our results revealed significant variations in the occurrence of specific microstate maps, particularly between the early follicular and mid-luteal phases. Furthermore, the occurrence of these specific configurations was significantly associated with fluctuations in hormone levels. Critically, both the hormonal levels and microstate dynamics were predictive of individual longitudinal changes in psychological well-being. These findings propose a neurophysiological substrate for the behavioral effects of hormonal cycling, identifying specific topographic maps whose dynamics are sensitive to the hormonal profile and carry predictive power for psychological health. Collectively, these results underscore the necessity of accounting for the MC in neuroimaging research and introduce a novel framework for defining microstates (Hormone-Dependent Microstates - HDMs) with respect to slowly changing dynamical properties across a month-long timescale.

neuroscience↗

bioRxiv2025

The role of structural heterogeneity in shaping whole-brain dynamics across scales

The brain must rapidly and dynamically recruit the appropriate brain regions to respond to environmental changes and sustain flexible cognition. An extensive body of literature views the ability to spontaneously explore a rich repertoire of activity patterns, even during rest, as a correlate of the capacity to respond rapidly to internal fluctuations and external stimuli. Moreover, brain flexibility at rest successfully indexes pathological conditions such as Parkinsons disease, multiple sclerosis, and amyotrophic lateral sclerosis. However, previous work provides no information about the contribution of each region to the flexibility of brain dynamics. Given the functional and structural heterogeneity of brain regions, we hypothesized their roles in sustaining flexibility to be heterogeneous and related to regional structural properties. To systematically investigate these hypotheses, we define the flexibility gradient (FG), a new measure, which quantifies regional contributions to flexibility. We employed three datasets spanning different recording techniques and a range of spatial and temporal scales: 47 MEG recordings, 11 EEG recordings, and 77 fMRI recordings along with the corresponding tractographies. We found that FG is not homogeneously distributed, with associative and occipital regions contributing the most. This gradient is symmetric across left and right hemispheres, and the structural properties of brain regions correlate with their contribution to flexibility. Our findings are stable across modalities and temporal scales, highlighting that brain flexibility is not only a global dynamical property but also a spatially structured feature shaped by the anatomical organization of the brain.

neuroscience↗

bioRxiv2022

The development of efficient communication in the human connectome.

The structure of the human connectome develops from childhood throughout adolescence to middle age, but how this affects the speed of neuronal signaling is not well described. To understand the maturation process of transmission speed across the connectome, we stimulated electrocorticographic (ECoG) electrode pairs in 75 human subjects of 4 to 51 years old. We then measured the latency of cortico-cortical evoked responses in other electrodes. Each year, responses got faster, until transmission speed reached a minimum latency at the age of 29-44 years old. Responses during middle age were about two times faster compared to childhood. These increases in speed were observed in both long- and short-range connections between and within frontal, central, parietal, and temporal areas. These findings indicate that long-range and short-range communication between brain regions increase in efficiency well throughout adolescence.

neuroscience↗

bioRxiv2020

Scorepochs: a computer-aided scoring tool for resting-state M/EEG epochs

M/EEG resting-state analysis often requires the definition of the epoch length and the criteria to select which epochs to include in the subsequent steps. However, the effects of epoch selection remain scarcely investigated and the procedure used to (visually) inspect, label, and remove bad epochs is often not documented, thus hindering the reproducibility of the reported results. In this study, we present Scorepochs, a simple and freely available tool for the automatic scoring of resting-state M/EEG epochs that aims to provide an objective method to aid M/EEG experts during epoch selection procedure. We tested our approach on a freely available EEG dataset containing recordings from 109 subjects using the BCI2000 64-channel system.

bioengineering↗

bioRxiv2019

Subject, session and task effects on power, connectivity and network centrality: a source-based EEG study

Inter-subjects variability in functional brain networks has been extensively investigated in the last few years. In this context, unveiling subject-specific characteristics of EEG features may play an important role for both clinical (e.g., biomarkers) and bio-engineering purposes (e.g., biometric systems and brain computer interfaces). Nevertheless, the effects induced by multi-sessions and task-switching are not completely understood and considered. In this work, we aimed to investigate how the variability due to subject, session and task affects EEG power, connectivity and network features estimated using source-reconstructed EEG time-series. Our results point out a remarkable ability to identify subject-specific EEG traits within a given task together with striking independence from the session. The results also show a relevant effect of task-switching, which is comparable to individual variability. This study suggests that power and connectivity EEG features may be adequate to detect stable (over-time) individual properties within predefined and controlled tasks.

bioengineering↗

bioRxiv2019

A comparison between power spectral density and network metrics: an EEG study

Power spectral density (PSD) and network analysis performed on functional correlation (FC) patterns represent two common approaches used to characterize Electroencephalographic (EEG) data. Despite the two approaches are widely used, their possible association may need more attention. To investigate this question, we performed a comparison between PSD and some widely used nodal network metrics (namely strength, clustering coefficient and betweenness centrality), using two different publicly available resting-state EEG datasets, both at scalp and source levels, employing four different FC methods (PLV, PLI, AEC and AECC). Here we show that the two approaches may provide similar information and that their correlation depends on the method used to estimate FC. In particular, our results show a strong correlation between PSD and nodal network metrics derived from FC methods (PLV and AEC) that do not limit the effects of volume conduction/signal leakage. The correlations are less relevant for more conservative FC methods (AECC). These findings suggest that the results derived from the two different approaches may be not independent and should not be treated as distinct analyses. We conclude that it may represent good practice to report the findings from the two approaches in conjunction to have a more comprehensive view of the results.

bioengineering↗

bioRxiv2017

A Comparison Between Scalp- And Source-Reconstructed EEG Networks

EEG can be used to characterise functional networks using a variety of connectivity (FC) metrics. Unlike EEG source reconstruction, scalp analysis does not allow to make inferences about interacting regions, yet this latter approach has not been abandoned. Although the two approaches use different assumptions, conclusions drawn regarding the topology of the underlying networks should, ideally, not depend on the approach. The aim of the present work was to find an answer to the following questions: does scalp analysis provide a correct estimate of the network topology? how big are the distortions when using various pipelines in different experimental conditions? EEG recordings were analysed with amplitude- and phase-based metrics, founding a strong correlation for the global connectivity between scalp- and source-level. In contrast, network topology was only weakly correlated. The strongest correlations were obtained for MST leaf fraction, but only for FC metrics that limit the effects of volume conduction/signal leakage. These findings suggest that these effects alter the estimated EEG network organization, limiting the interpretation of results of scalp analysis. Finally, this study also suggests that the use of metrics that address the problem of zero lag correlations may give more reliable estimates of the underlying network topology.

neuroscience↗