Czeisler, C. A. | bioRxiv Science

bioRxiv2026

Short-term, Long-term, and Genetic Determinants of Human Plasma Proteome Variability

Plasma proteomics is increasingly used for biomarker discovery and predictive modeling, yet diurnal protein trajectories remain insufficiently characterized. In our review of recent proteomic biomarker studies, 43% of the identified biomarkers had previously been reported to display 24-h rhythmicity. We demonstrate that ignoring these short-term dynamic effects compromises the robustness of reported models predicting health outcomes. We integrated a population-scale multi-ethnic longitudinal cohort with repeated measures over 10 years, with two cohorts of healthy adults undergoing frequent plasma sampling across days under controlled circadian, sleep and food-intake conditions. This design enabled estimation of short-term intraindividual variability (ST), long-term intraindividual variability (LT), population-level variability (POP) and genetic effects (GEN) across 7,289 protein targets. ST, LT, POP, and GEN define diverse protein trajectories, including rapid dynamics, long-term change, and individual-specific signatures. Using and generalizing this framework will facilitate covariate selection, study design, biomarker prioritization, and variability-aware modeling by users of proteomic data.

genomics↗

bioRxiv2017

A (blue) light in the dark: Blue light modulates oscillatory alpha activity in the occipital cortex of totally visually blind individuals with intact non-visual photoreception

The discovery of intrinsically photosensitive retinal ganglion cells (ipRGCs) marked a major shift in our understanding of how light is processed by the mammalian brain. These ipRGCs influence multiple functions not directly related to vision such as the synchronization of circadian rhythmicity, pupil constriction, the regulation of alertness and sleep, as well as the modulation of cognition. More recently, it was demonstrated that ipRGCs may also contribute to basic visual functions. The impact of ipRGCs on visual functions, independently of image forming photoreceptors, remains however difficult to isolate, particularly in humans. We previously showed that exposure to intense monochromatic blue light (465nm) induced awareness of light in a forced choice task in three rare totally visually blind individuals without detectable rod and cone function, but who retained non-visual responses to light, very likely via ipRGCs. The neural foundation of such light awareness in the absence of conscious vision is unknown, however. In this study, we characterized the brain activity of these three rare participants using electroencephalography (EEG), and demonstrate that unconsciously perceived light triggers an early and reliable transient desynchronization (i.e. decreased power) of the alpha EEG rhythm (8-14 Hz) over the occipital cortex. These results provide compelling insight into how ipRGC may contribute to transient changes in ongoing brain activity. They suggest that occipital alpha rhythm synchrony, which is typically linked to the visual system, is modulated by ipRGCs photoreception; a process that may contribute to the awareness of light in those blind individuals.

neuroscience↗