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Costa, F. C. L.

Publications and source records attributed to Costa, F. C. L..

2 recordsLinked to original sources

Color traits of soybean conventional and transgenic cultivars are affected by glyphosate concentrations using digital imaging

Soybean is the most cultivated oilseed crop in the world, with much of the merit obtained in recent years due to genetic improvement in which greater genetic progress can be obtained by improving physiological characteristics, which result in a greater impact on yield. Color spectra can be good indicators of the physiological quality of plants by quantifying the intensity of colors in the RGB spectra, being a non-destructive method that allows optimizing the collection and the number of data. We aimed to identify differences in spectral reflection between conventional, transgenic RR1 and RR2 soybean cultivars under the effect of glyphosate herbicide. The plants were cultivated in five-liter pots in a greenhouse in a randomized block design, following cultural treatments recommended for the soybean crop. Leaves of plants in vegetative stages V1 or V2 were collected and duly identified to compose a second experiment, being then submitted to incubation in plastic trays in which the treatments were organized in a completely randomized design in a 6x6 factorial scheme, with three replications. Glyphosate herbicide doses (0.0, 0.03%, 0.06%, 0.12% and 0.24% AE/ha) were added to the leaf petiole on a cotton pad in order to maintain constant contact with the respective dose. The trays were kept under ambient conditions for 14 days after incubation under 16h-light and 8h-dark of artificial light. Images were collected with a smartphone camera on the 13th day after leaves collection (DAC) in an appropriate studio to maintain adequate lighting, and on the 14th DAC SPAD index data were collected in three locations on the leaf, avoiding the midrib. The images were cropped and then segmented using manual thresholding in which the average values for the red, green and blue channels were extracted. The Excess Red Index (ExR) was calculated using the red and green channels data. The data obtained were analyzed and the significant effects of the model were analyzed by the Skott-Knott test for the cultivar factor and regression models were adjusted for the dose factor. Spearmans correlation was used to verify the relationship between the studied variables. In view of our results, glyphosate affects the chlorophyll of resistant plants when subjected to continuous exposure and at high doses, leading to senescence and that the red channel information can be used to infer the level of interference in the photosynthetic activity of plants subjected to the herbicide.

plant biology↗

The Cucumber Kinome: genome-wide, identification, characterisation and expression analysis of the Cucumis sativus protein kinases in response to Powdery Mildew, Alternaria Leaf Spot and Root-Knot Nematode

It is widely known that protein kinases (PKs) play a fundamental role in regulating various metabolic processes in plants, from development to response to the environment. However, a detailed characterization of this superfamily is still lacking for several species, such as cucumber (Cucumis sativus), especially regarding their involvement in the response to Powdery Mildew (PM) caused by Podosphaera xanthii. This study aimed to characterize the cucumber PK family, shedding light on its genomic distribution, classification, and expression patterns triggered by P. xanthii. The hidden Markov models (HMMs) analysis uncovered 835 PKs in the cucumber kinome, distributed across its seven chromosomes, and categorized into 20 distinct groups and 123 families, with the RLK group being the most abundant. Evidence of tandem duplication of PK genes was also observed, enriching our understanding of cucumber PKs. To investigate the expression profiles of PK genes in cucumber, we analyzed the transcription levels of all 835 PK genes in RNA-seq data from leaves of resistant and susceptible cultivars of cucumber to P. xanthii, which were artificially inoculated. Depending on the treatment, DEGs ranged from 319 to 1,690, with PK DEGs ranging from 8 to 105. The number of PK DEGs varied between the different contrasts analyzed. Notably, we observed a greater number of PK DEGs in susceptible genotypes when challenged by the pathogen. Our findings indicate the role of specific cucumber PKs in regulating metabolic processes in the context of plant-pathogen interactions and pave the way for further research into the intricate mechanisms underlying cucumber responses to Powdery Mildew. Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=169 SRC="FIGDIR/small/532963v3_ufig1.gif" ALT="Figure 1"> View larger version (42K): org.highwire.dtl.DTLVardef@11340b8org.highwire.dtl.DTLVardef@fe1896org.highwire.dtl.DTLVardef@5de8org.highwire.dtl.DTLVardef@1564d0_HPS_FORMAT_FIGEXP M_FIG C_FIG

genomics↗